Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
LOC107089661 | aasdh | ENSCVAP00000016065 | ENSCVAP00000009428 | Si:dkey-178e17.3. | Aminoadipate-semialdehyde dehydrogenase. | 0.767 |
LOC107089661 | hsdl2 | ENSCVAP00000016065 | ENSCVAP00000011238 | Si:dkey-178e17.3. | Hydroxysteroid dehydrogenase like 2. | 0.749 |
LOC107089661 | med10 | ENSCVAP00000016065 | ENSCVAP00000028719 | Si:dkey-178e17.3. | Mediator of RNA polymerase II transcription subunit 10; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.724 |
LOC107089661 | med14 | ENSCVAP00000016065 | ENSCVAP00000032764 | Si:dkey-178e17.3. | Mediator of RNA polymerase II transcription subunit 14; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.741 |
LOC107089661 | med15 | ENSCVAP00000016065 | ENSCVAP00000026803 | Si:dkey-178e17.3. | Mediator of RNA polymerase II transcription subunit 15; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.723 |
LOC107089661 | med23 | ENSCVAP00000016065 | ENSCVAP00000013570 | Si:dkey-178e17.3. | Mediator complex subunit 23. | 0.728 |
LOC107089661 | med31 | ENSCVAP00000016065 | ENSCVAP00000025785 | Si:dkey-178e17.3. | Mediator of RNA polymerase II transcription subunit 31; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.703 |
LOC107089661 | med6 | ENSCVAP00000016065 | ENSCVAP00000032443 | Si:dkey-178e17.3. | Mediator of RNA polymerase II transcription subunit 6; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.708 |
LOC107089661 | ndufab1 | ENSCVAP00000016065 | ENSCVAP00000018969 | Si:dkey-178e17.3. | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. | 0.713 |
LOC107089661 | palb2 | ENSCVAP00000016065 | ENSCVAP00000030262 | Si:dkey-178e17.3. | PALB2_WD40 domain-containing protein. | 0.713 |
aasdh | LOC107089661 | ENSCVAP00000009428 | ENSCVAP00000016065 | Aminoadipate-semialdehyde dehydrogenase. | Si:dkey-178e17.3. | 0.767 |
aasdh | hsdl2 | ENSCVAP00000009428 | ENSCVAP00000011238 | Aminoadipate-semialdehyde dehydrogenase. | Hydroxysteroid dehydrogenase like 2. | 0.635 |
aasdh | ndufab1 | ENSCVAP00000009428 | ENSCVAP00000018969 | Aminoadipate-semialdehyde dehydrogenase. | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. | 0.968 |
aasdh | palb2 | ENSCVAP00000009428 | ENSCVAP00000030262 | Aminoadipate-semialdehyde dehydrogenase. | PALB2_WD40 domain-containing protein. | 0.968 |
hsdl2 | LOC107089661 | ENSCVAP00000011238 | ENSCVAP00000016065 | Hydroxysteroid dehydrogenase like 2. | Si:dkey-178e17.3. | 0.749 |
hsdl2 | aasdh | ENSCVAP00000011238 | ENSCVAP00000009428 | Hydroxysteroid dehydrogenase like 2. | Aminoadipate-semialdehyde dehydrogenase. | 0.635 |
hsdl2 | med14 | ENSCVAP00000011238 | ENSCVAP00000032764 | Hydroxysteroid dehydrogenase like 2. | Mediator of RNA polymerase II transcription subunit 14; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.534 |
hsdl2 | ndufab1 | ENSCVAP00000011238 | ENSCVAP00000018969 | Hydroxysteroid dehydrogenase like 2. | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. | 0.697 |
hsdl2 | palb2 | ENSCVAP00000011238 | ENSCVAP00000030262 | Hydroxysteroid dehydrogenase like 2. | PALB2_WD40 domain-containing protein. | 0.697 |
med10 | LOC107089661 | ENSCVAP00000028719 | ENSCVAP00000016065 | Mediator of RNA polymerase II transcription subunit 10; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | Si:dkey-178e17.3. | 0.724 |
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