Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| LOC107087794 | LOC107095898 | ENSCVAP00000002678 | ENSCVAP00000016543 | Si:dkey-24p1.6. | Uncharacterized protein. | 0.652 |
| LOC107087794 | LOC107103646 | ENSCVAP00000002678 | ENSCVAP00000009186 | Si:dkey-24p1.6. | Derlin; Functional component of endoplasmic reticulum-associated degradation (ERAD) for misfolded lumenal proteins. May act by forming a channel that allows the retrotranslocation of misfolded proteins into the cytosol where they are ubiquitinated and degraded by the proteasome; Belongs to the derlin family. | 0.949 |
| LOC107094895 | LOC107095898 | ENSCVAP00000011535 | ENSCVAP00000016543 | Uncharacterized protein. | Uncharacterized protein. | 0.652 |
| LOC107094895 | LOC107103646 | ENSCVAP00000011535 | ENSCVAP00000009186 | Uncharacterized protein. | Derlin; Functional component of endoplasmic reticulum-associated degradation (ERAD) for misfolded lumenal proteins. May act by forming a channel that allows the retrotranslocation of misfolded proteins into the cytosol where they are ubiquitinated and degraded by the proteasome; Belongs to the derlin family. | 0.949 |
| LOC107095898 | LOC107087794 | ENSCVAP00000016543 | ENSCVAP00000002678 | Uncharacterized protein. | Si:dkey-24p1.6. | 0.652 |
| LOC107095898 | LOC107094895 | ENSCVAP00000016543 | ENSCVAP00000011535 | Uncharacterized protein. | Uncharacterized protein. | 0.652 |
| LOC107095898 | LOC107103646 | ENSCVAP00000016543 | ENSCVAP00000009186 | Uncharacterized protein. | Derlin; Functional component of endoplasmic reticulum-associated degradation (ERAD) for misfolded lumenal proteins. May act by forming a channel that allows the retrotranslocation of misfolded proteins into the cytosol where they are ubiquitinated and degraded by the proteasome; Belongs to the derlin family. | 0.874 |
| LOC107095898 | cope | ENSCVAP00000016543 | ENSCVAP00000018475 | Uncharacterized protein. | Coatomer subunit epsilon; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. The coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins. Belongs to the COPE family. | 0.530 |
| LOC107095898 | eprs1 | ENSCVAP00000016543 | ENSCVAP00000022480 | Uncharacterized protein. | Glutamyl-prolyl-tRNA synthetase. | 0.536 |
| LOC107095898 | ergic3 | ENSCVAP00000016543 | ENSCVAP00000000070 | Uncharacterized protein. | ERGIC and golgi 3. | 0.939 |
| LOC107095898 | gtpbp3 | ENSCVAP00000016543 | ENSCVAP00000018699 | Uncharacterized protein. | GTP binding protein 3, mitochondrial; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family. | 0.947 |
| LOC107095898 | sel1l | ENSCVAP00000016543 | ENSCVAP00000017913 | Uncharacterized protein. | SEL1L adaptor subunit of ERAD E3 ubiquitin ligase. | 0.657 |
| LOC107095898 | trmu | ENSCVAP00000016543 | ENSCVAP00000000449 | Uncharacterized protein. | tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase. | 0.782 |
| LOC107095898 | yars1 | ENSCVAP00000016543 | ENSCVAP00000014000 | Uncharacterized protein. | Tyrosine--tRNA ligase. | 0.636 |
| LOC107103646 | LOC107087794 | ENSCVAP00000009186 | ENSCVAP00000002678 | Derlin; Functional component of endoplasmic reticulum-associated degradation (ERAD) for misfolded lumenal proteins. May act by forming a channel that allows the retrotranslocation of misfolded proteins into the cytosol where they are ubiquitinated and degraded by the proteasome; Belongs to the derlin family. | Si:dkey-24p1.6. | 0.949 |
| LOC107103646 | LOC107094895 | ENSCVAP00000009186 | ENSCVAP00000011535 | Derlin; Functional component of endoplasmic reticulum-associated degradation (ERAD) for misfolded lumenal proteins. May act by forming a channel that allows the retrotranslocation of misfolded proteins into the cytosol where they are ubiquitinated and degraded by the proteasome; Belongs to the derlin family. | Uncharacterized protein. | 0.949 |
| LOC107103646 | LOC107095898 | ENSCVAP00000009186 | ENSCVAP00000016543 | Derlin; Functional component of endoplasmic reticulum-associated degradation (ERAD) for misfolded lumenal proteins. May act by forming a channel that allows the retrotranslocation of misfolded proteins into the cytosol where they are ubiquitinated and degraded by the proteasome; Belongs to the derlin family. | Uncharacterized protein. | 0.874 |
| LOC107103646 | sel1l | ENSCVAP00000009186 | ENSCVAP00000017913 | Derlin; Functional component of endoplasmic reticulum-associated degradation (ERAD) for misfolded lumenal proteins. May act by forming a channel that allows the retrotranslocation of misfolded proteins into the cytosol where they are ubiquitinated and degraded by the proteasome; Belongs to the derlin family. | SEL1L adaptor subunit of ERAD E3 ubiquitin ligase. | 0.994 |
| cope | LOC107095898 | ENSCVAP00000018475 | ENSCVAP00000016543 | Coatomer subunit epsilon; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. The coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins. Belongs to the COPE family. | Uncharacterized protein. | 0.530 |
| cope | ergic3 | ENSCVAP00000018475 | ENSCVAP00000000070 | Coatomer subunit epsilon; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. The coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins. Belongs to the COPE family. | ERGIC and golgi 3. | 0.539 |
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