STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107090391Glia maturation factor; Belongs to the actin-binding proteins ADF family. GMF subfamily. (131 aa)    
Predicted Functional Partners:
LOC107095754
Actin-related protein 2; ATP-binding component of the Arp2/3 complex, a multiprotein complex that mediates actin polymerization upon stimulation by nucleation-promoting factor (NPF). The Arp2/3 complex mediates the formation of branched actin networks in the cytoplasm, providing the force for cell motility. Seems to contact the pointed end of the daughter actin filament.
   
 
 0.773
LOC107085266
Zgc:101810; Belongs to the actin family.
   
 
 0.773
twf1
Twinfilin actin-binding protein 1a.
   
 
 0.684
FUT4
Fucosyltransferase 4.
      
 0.662
lactb
Lactamase, beta.
    
 
 0.643
ACTR3
Actin related protein 3; Belongs to the actin family.
   
 
 0.598
ENSCVAP00000029807
Actin related protein 3.
   
 
 0.598
actr3
Uncharacterized protein; Belongs to the actin family.
   
 
 0.598
arpc2
Arp2/3 complex 34 kDa subunit; Functions as actin-binding component of the Arp2/3 complex which is involved in regulation of actin polymerization and together with an activating nucleation-promoting factor (NPF) mediates the formation of branched actin networks.
    
 
 0.574
gpbar1
G protein-coupled bile acid receptor 1.
    
 
 0.573
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.