STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cdk1Cyclin-dependent kinase 1; Belongs to the protein kinase superfamily. (301 aa)    
Predicted Functional Partners:
ccnb1
Cyclin B1; Belongs to the cyclin family.
   
 0.995
LOC107085054
Cyclin B2; Belongs to the cyclin family.
   
 0.990
cdc25b
Rhodanese domain-containing protein.
   
 0.989
ccna2
Cyclin A2; Belongs to the cyclin family.
   
 0.988
ccna1
Cyclin N-terminal domain-containing protein; Belongs to the cyclin family.
   
 0.987
ccnb3
Cyclin B3; Belongs to the cyclin family.
   
 0.982
rb1
Retinoblastoma 1.
   
 0.977
pkmyt1
Protein kinase, membrane associated tyrosine/threonine 1.
  
0.977
wee2
Wee1-like protein kinase.
   
0.975
wee1
Wee1-like protein kinase.
   
0.975
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.