STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCVAP00000018154Drf_GBD domain-containing protein. (99 aa)    
Predicted Functional Partners:
Suox
Sulfite oxidase.
      
 0.624
LOC107082627
Profilin; Belongs to the profilin family.
    
 0.604
pfn2
Profilin; Belongs to the profilin family.
    
 0.604
ENSCVAP00000026273
Profilin; Belongs to the profilin family.
    
 0.604
LOC107102310
Profilin; Belongs to the profilin family.
    
 0.604
LOC107099133
Uncharacterized protein.
    
 0.564
LOC107092037
Uncharacterized protein.
    
 0.564
LOC107098535
Ras homolog family member Ca.
    
 0.564
RHOB
Ras homolog family member B.
    
 0.564
LOC107103110
Uncharacterized protein.
    
 0.564
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.