STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107099244Fork-head domain-containing protein. (633 aa)    
Predicted Functional Partners:
akt1
Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.
    
 0.972
LOC107099926
Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.
    
 0.972
LOC107083482
Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.
    
 0.972
ENSCVAP00000029198
V-akt murine thymoma viral oncogene homolog 3b.
    
 0.972
usp7
Ubiquitin specific peptidase 7 (herpes virus-associated); Belongs to the peptidase C19 family.
   
 0.965
ppargc1a
Peroxisome proliferator-activated receptor gamma, coactivator 1 alpha.
    
 0.950
stk11
Serine/threonine kinase 11; Belongs to the protein kinase superfamily.
    
 0.937
cdk2
Cyclin-dependent kinase 2; Belongs to the protein kinase superfamily.
    
 0.926
LOC107100240
Uncharacterized protein.
    
 0.918
LOC107101186
Mitogen-activated protein kinase.
    
 0.915
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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