Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ENSCVAP00000013768 | ENSCVAP00000019362 | ENSCVAP00000013768 | ENSCVAP00000019362 | Hect domain and RLD 7. | SPRY domain-containing protein. | 0.904 |
ENSCVAP00000013768 | ENSCVAP00000019395 | ENSCVAP00000013768 | ENSCVAP00000019395 | Hect domain and RLD 7. | Uncharacterized protein. | 0.721 |
ENSCVAP00000013768 | ENSCVAP00000019411 | ENSCVAP00000013768 | ENSCVAP00000019411 | Hect domain and RLD 7. | HECT domain-containing protein. | 0.540 |
ENSCVAP00000013768 | ENSCVAP00000028934 | ENSCVAP00000013768 | ENSCVAP00000028934 | Hect domain and RLD 7. | Uncharacterized protein. | 0.772 |
ENSCVAP00000013768 | Herc1 | ENSCVAP00000013768 | ENSCVAP00000032585 | Hect domain and RLD 7. | WD_REPEATS_REGION domain-containing protein. | 0.893 |
ENSCVAP00000013768 | ND4 | ENSCVAP00000013768 | ENSCVAP00000000011 | Hect domain and RLD 7. | NADH-ubiquinone oxidoreductase chain 4; Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone. | 0.532 |
ENSCVAP00000013768 | pias4 | ENSCVAP00000013768 | ENSCVAP00000014848 | Hect domain and RLD 7. | Protein inhibitor of activated STAT, 4a. | 0.479 |
ENSCVAP00000013768 | ranbp2 | ENSCVAP00000013768 | ENSCVAP00000013540 | Hect domain and RLD 7. | RAN binding protein 2. | 0.590 |
ENSCVAP00000013768 | rnf8 | ENSCVAP00000013768 | ENSCVAP00000021481 | Hect domain and RLD 7. | E3 ubiquitin-protein ligase RNF8; E3 ubiquitin-protein ligase that plays a key role in DNA damage signaling via 2 distinct roles: by mediating the 'Lys-63'-linked ubiquitination of histones H2A and H2AX and promoting the recruitment of DNA repair proteins at double-strand breaks (DSBs) sites, and by catalyzing 'Lys-48'-linked ubiquitination to remove target proteins from DNA damage sites. Following DNA DSBs, it is recruited to the sites of damage by ATM-phosphorylated MDC1 and catalyzes the 'Lys-63'-linked ubiquitination of histones H2A and H2AX, thereby promoting the formation of TP53 [...] | 0.616 |
ENSCVAP00000013768 | zfand4 | ENSCVAP00000013768 | ENSCVAP00000011463 | Hect domain and RLD 7. | Zinc finger, AN1-type domain 4. | 0.483 |
ENSCVAP00000019362 | ENSCVAP00000013768 | ENSCVAP00000019362 | ENSCVAP00000013768 | SPRY domain-containing protein. | Hect domain and RLD 7. | 0.904 |
ENSCVAP00000019362 | ENSCVAP00000019395 | ENSCVAP00000019362 | ENSCVAP00000019395 | SPRY domain-containing protein. | Uncharacterized protein. | 0.891 |
ENSCVAP00000019362 | ENSCVAP00000019411 | ENSCVAP00000019362 | ENSCVAP00000019411 | SPRY domain-containing protein. | HECT domain-containing protein. | 0.790 |
ENSCVAP00000019362 | Herc1 | ENSCVAP00000019362 | ENSCVAP00000032585 | SPRY domain-containing protein. | WD_REPEATS_REGION domain-containing protein. | 0.848 |
ENSCVAP00000019362 | ND4 | ENSCVAP00000019362 | ENSCVAP00000000011 | SPRY domain-containing protein. | NADH-ubiquinone oxidoreductase chain 4; Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone. | 0.532 |
ENSCVAP00000019362 | pias4 | ENSCVAP00000019362 | ENSCVAP00000014848 | SPRY domain-containing protein. | Protein inhibitor of activated STAT, 4a. | 0.479 |
ENSCVAP00000019362 | ranbp2 | ENSCVAP00000019362 | ENSCVAP00000013540 | SPRY domain-containing protein. | RAN binding protein 2. | 0.590 |
ENSCVAP00000019362 | rnf8 | ENSCVAP00000019362 | ENSCVAP00000021481 | SPRY domain-containing protein. | E3 ubiquitin-protein ligase RNF8; E3 ubiquitin-protein ligase that plays a key role in DNA damage signaling via 2 distinct roles: by mediating the 'Lys-63'-linked ubiquitination of histones H2A and H2AX and promoting the recruitment of DNA repair proteins at double-strand breaks (DSBs) sites, and by catalyzing 'Lys-48'-linked ubiquitination to remove target proteins from DNA damage sites. Following DNA DSBs, it is recruited to the sites of damage by ATM-phosphorylated MDC1 and catalyzes the 'Lys-63'-linked ubiquitination of histones H2A and H2AX, thereby promoting the formation of TP53 [...] | 0.616 |
ENSCVAP00000019362 | zfand4 | ENSCVAP00000019362 | ENSCVAP00000011463 | SPRY domain-containing protein. | Zinc finger, AN1-type domain 4. | 0.483 |
ENSCVAP00000019395 | ENSCVAP00000013768 | ENSCVAP00000019395 | ENSCVAP00000013768 | Uncharacterized protein. | Hect domain and RLD 7. | 0.721 |
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