STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCVAP00000021498PDEase domain-containing protein. (104 aa)    
Predicted Functional Partners:
Pde2a
PDEase domain-containing protein.
 
     0.926
pde6g
Phosphodiesterase 6G, cGMP-specific, rod, gamma, paralog b.
   
 0.749
ENSCVAP00000019338
Uncharacterized protein.
    
 0.675
rnpepl1
Arginyl aminopeptidase like 1.
     
 0.458
PDE1C
Phosphodiesterase.
    
 0.453
pde1b
Phosphodiesterase.
    
 0.453
LOC107104673
Phosphodiesterase.
    
 0.453
rhobtb2
Rho related BTB domain containing 2a.
    
  0.401
LOC107084546
Rho related BTB domain containing 4.
    
  0.401
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.