STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slc17a6Solute carrier family 17 member 6. (278 aa)    
Predicted Functional Partners:
RIMS2
Regulating synaptic membrane exocytosis 2.
   
 
 0.698
LOC107084483
Uncharacterized protein.
     
 0.694
LOC107095553
Regulating synaptic membrane exocytosis protein 2 isoform X1.
     
 0.694
ENSCVAP00000003642
Solute carrier family 17 member 6.
 
     0.543
slc6a5
Transporter; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family.
   
  
 0.484
LOC107089083
Coiled-coil domain containing 85A, like.
      
 0.483
LOC107086112
V-SNARE coiled-coil homology domain-containing protein.
   
 
 0.446
Vamp1
Zgc:92912.
   
 
 0.446
LOC107082578
Vesicle-associated membrane protein 2.
   
 
 0.446
syt1
Synaptotagmin Ia.
   
 
 0.435
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.