Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ENSCVAP00000015893 | crppa | ENSCVAP00000015893 | ENSCVAP00000022295 | NDK domain-containing protein. | CDP-L-ribitol pyrophosphorylase A. | 0.690 |
LOC107090723 | crppa | ENSCVAP00000031618 | ENSCVAP00000022295 | Ubiquitin-conjugating enzyme E2 variant 1. | CDP-L-ribitol pyrophosphorylase A. | 0.956 |
LOC107090723 | rad23a | ENSCVAP00000031618 | ENSCVAP00000016224 | Ubiquitin-conjugating enzyme E2 variant 1. | RAD23 homolog A, nucleotide excision repair protein a. | 0.890 |
LOC107090723 | rad23b | ENSCVAP00000031618 | ENSCVAP00000030779 | Ubiquitin-conjugating enzyme E2 variant 1. | RAD23 homolog B, nucleotide excision repair protein. | 0.890 |
LOC107096760 | Pcid2 | ENSCVAP00000023694 | ENSCVAP00000021854 | Transcription and mRNA export factor ENY2; Involved in mRNA export coupled transcription activation by association with both the TREX-2 and the SAGA complexes. The transcription regulatory histone acetylation (HAT) complex SAGA is a multiprotein complex that activates transcription by remodeling chromatin and mediating histone acetylation and deubiquitination. Within the SAGA complex, participates to a subcomplex that specifically deubiquitinates histones. The SAGA complex is recruited to specific gene promoters by activators, where it is required for transcription. The TREX-2 complex [...] | Uncharacterized protein. | 0.927 |
LOC107096760 | crppa | ENSCVAP00000023694 | ENSCVAP00000022295 | Transcription and mRNA export factor ENY2; Involved in mRNA export coupled transcription activation by association with both the TREX-2 and the SAGA complexes. The transcription regulatory histone acetylation (HAT) complex SAGA is a multiprotein complex that activates transcription by remodeling chromatin and mediating histone acetylation and deubiquitination. Within the SAGA complex, participates to a subcomplex that specifically deubiquitinates histones. The SAGA complex is recruited to specific gene promoters by activators, where it is required for transcription. The TREX-2 complex [...] | CDP-L-ribitol pyrophosphorylase A. | 0.813 |
LOC107096760 | mcm3ap | ENSCVAP00000023694 | ENSCVAP00000019319 | Transcription and mRNA export factor ENY2; Involved in mRNA export coupled transcription activation by association with both the TREX-2 and the SAGA complexes. The transcription regulatory histone acetylation (HAT) complex SAGA is a multiprotein complex that activates transcription by remodeling chromatin and mediating histone acetylation and deubiquitination. Within the SAGA complex, participates to a subcomplex that specifically deubiquitinates histones. The SAGA complex is recruited to specific gene promoters by activators, where it is required for transcription. The TREX-2 complex [...] | Minichromosome maintenance complex component 3 associated protein. | 0.996 |
LOC107096760 | sac3d1 | ENSCVAP00000023694 | ENSCVAP00000030556 | Transcription and mRNA export factor ENY2; Involved in mRNA export coupled transcription activation by association with both the TREX-2 and the SAGA complexes. The transcription regulatory histone acetylation (HAT) complex SAGA is a multiprotein complex that activates transcription by remodeling chromatin and mediating histone acetylation and deubiquitination. Within the SAGA complex, participates to a subcomplex that specifically deubiquitinates histones. The SAGA complex is recruited to specific gene promoters by activators, where it is required for transcription. The TREX-2 complex [...] | Si:zfos-452g4.1. | 0.936 |
Pcid2 | LOC107096760 | ENSCVAP00000021854 | ENSCVAP00000023694 | Uncharacterized protein. | Transcription and mRNA export factor ENY2; Involved in mRNA export coupled transcription activation by association with both the TREX-2 and the SAGA complexes. The transcription regulatory histone acetylation (HAT) complex SAGA is a multiprotein complex that activates transcription by remodeling chromatin and mediating histone acetylation and deubiquitination. Within the SAGA complex, participates to a subcomplex that specifically deubiquitinates histones. The SAGA complex is recruited to specific gene promoters by activators, where it is required for transcription. The TREX-2 complex [...] | 0.927 |
Pcid2 | crppa | ENSCVAP00000021854 | ENSCVAP00000022295 | Uncharacterized protein. | CDP-L-ribitol pyrophosphorylase A. | 0.710 |
Pcid2 | mcm3ap | ENSCVAP00000021854 | ENSCVAP00000019319 | Uncharacterized protein. | Minichromosome maintenance complex component 3 associated protein. | 0.951 |
Pcid2 | sac3d1 | ENSCVAP00000021854 | ENSCVAP00000030556 | Uncharacterized protein. | Si:zfos-452g4.1. | 0.931 |
crppa | ENSCVAP00000015893 | ENSCVAP00000022295 | ENSCVAP00000015893 | CDP-L-ribitol pyrophosphorylase A. | NDK domain-containing protein. | 0.690 |
crppa | LOC107090723 | ENSCVAP00000022295 | ENSCVAP00000031618 | CDP-L-ribitol pyrophosphorylase A. | Ubiquitin-conjugating enzyme E2 variant 1. | 0.956 |
crppa | LOC107096760 | ENSCVAP00000022295 | ENSCVAP00000023694 | CDP-L-ribitol pyrophosphorylase A. | Transcription and mRNA export factor ENY2; Involved in mRNA export coupled transcription activation by association with both the TREX-2 and the SAGA complexes. The transcription regulatory histone acetylation (HAT) complex SAGA is a multiprotein complex that activates transcription by remodeling chromatin and mediating histone acetylation and deubiquitination. Within the SAGA complex, participates to a subcomplex that specifically deubiquitinates histones. The SAGA complex is recruited to specific gene promoters by activators, where it is required for transcription. The TREX-2 complex [...] | 0.813 |
crppa | Pcid2 | ENSCVAP00000022295 | ENSCVAP00000021854 | CDP-L-ribitol pyrophosphorylase A. | Uncharacterized protein. | 0.710 |
crppa | fktn | ENSCVAP00000022295 | ENSCVAP00000019045 | CDP-L-ribitol pyrophosphorylase A. | Fukutin. | 0.955 |
crppa | mcm3ap | ENSCVAP00000022295 | ENSCVAP00000019319 | CDP-L-ribitol pyrophosphorylase A. | Minichromosome maintenance complex component 3 associated protein. | 0.710 |
crppa | rad23a | ENSCVAP00000022295 | ENSCVAP00000016224 | CDP-L-ribitol pyrophosphorylase A. | RAD23 homolog A, nucleotide excision repair protein a. | 0.729 |
crppa | rad23b | ENSCVAP00000022295 | ENSCVAP00000030779 | CDP-L-ribitol pyrophosphorylase A. | RAD23 homolog B, nucleotide excision repair protein. | 0.729 |
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