STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
epas1Uncharacterized protein. (432 aa)    
Predicted Functional Partners:
ubxn7
UBX domain protein 7.
    
 0.929
vhl
Von Hippel-Lindau tumor suppressor.
    
 0.881
egln1
Egl-9 family hypoxia-inducible factor 1a.
    
 0.869
arnt2
Aryl-hydrocarbon receptor nuclear translocator 2.
   
0.830
LOC107088815
Aryl hydrocarbon receptor nuclear translocator.
   
0.830
eloc
Elongin C paralog a; Belongs to the SKP1 family.
    
 0.822
hif1an
Hypoxia inducible factor 1 subunit alpha inhibitor.
    
 0.816
Egln3
Egl-9 family hypoxia-inducible factor 3.
    
 0.788
LOC107094171
Egl-9 family hypoxia-inducible factor 2.
    
 0.788
ELOB
Elongin B.
    
 0.759
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.