STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107093887Inhibitor of DNA binding 1, HLH protein. (163 aa)    
Predicted Functional Partners:
id3
Inhibitor of DNA binding 3.
   
0.958
LOC107095712
Inhibitor of DNA binding 4.
  
  
0.921
ENSCVAP00000000718
ETS domain-containing protein.
     
 0.652
ets1
V-ets avian erythroblastosis virus E26 oncogene homolog 1.
     
 0.652
LOC107097873
Ets variant 2.
     
 0.652
LOC107095642
Transcription factor 12.
    
 
 0.621
LOC107100736
Uncharacterized protein.
    
 
 0.621
ENSCVAP00000020672
Uncharacterized protein.
    
 
 0.621
LOC107098382
Transcription factor 3b.
    
 
 0.621
ENSCVAP00000027909
Uncharacterized protein.
    
 
 0.621
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.