STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107083037Phospholipase A(2). (152 aa)    
Predicted Functional Partners:
pla2g12a
Phospholipase A2, group XIIA.
   
 
 0.978
LOC107085496
Uncharacterized protein.
   
 
 0.961
LOC107086825
PA2c domain-containing protein.
     
 0.961
proca1
Protein interacting with cyclin A1.
     
 0.961
LOC107091060
Phospholipase A(2).
  
  
0.959
LOC107097125
Phospholipase A2, group XIIB.
   
 
 0.945
LOC107097128
Uncharacterized protein.
   
 
 0.945
LOC107102418
PLA2c domain-containing protein.
     
 0.932
pla2g1b
Phospholipase A(2).
  
  
 
0.908
ptdss2
Phosphatidylserine synthase 2.
     
 0.905
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.