Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
LOC107084088 | chmp2a | ENSCVAP00000029511 | ENSCVAP00000026505 | Chromosome 1 open reading frame 43. | Charged multivesicular body protein 2A. | 0.408 |
LOC107084088 | emc2 | ENSCVAP00000029511 | ENSCVAP00000010089 | Chromosome 1 open reading frame 43. | ER membrane protein complex subunit 2. | 0.480 |
LOC107084088 | emc7 | ENSCVAP00000029511 | ENSCVAP00000014777 | Chromosome 1 open reading frame 43. | ER membrane protein complex subunit 7. | 0.607 |
chmp2a | LOC107084088 | ENSCVAP00000026505 | ENSCVAP00000029511 | Charged multivesicular body protein 2A. | Chromosome 1 open reading frame 43. | 0.408 |
chmp2a | emc7 | ENSCVAP00000026505 | ENSCVAP00000014777 | Charged multivesicular body protein 2A. | ER membrane protein complex subunit 7. | 0.583 |
emc2 | LOC107084088 | ENSCVAP00000010089 | ENSCVAP00000029511 | ER membrane protein complex subunit 2. | Chromosome 1 open reading frame 43. | 0.480 |
emc2 | emc7 | ENSCVAP00000010089 | ENSCVAP00000014777 | ER membrane protein complex subunit 2. | ER membrane protein complex subunit 7. | 0.961 |
emc7 | LOC107084088 | ENSCVAP00000014777 | ENSCVAP00000029511 | ER membrane protein complex subunit 7. | Chromosome 1 open reading frame 43. | 0.607 |
emc7 | chmp2a | ENSCVAP00000014777 | ENSCVAP00000026505 | ER membrane protein complex subunit 7. | Charged multivesicular body protein 2A. | 0.583 |
emc7 | emc2 | ENSCVAP00000014777 | ENSCVAP00000010089 | ER membrane protein complex subunit 7. | ER membrane protein complex subunit 2. | 0.961 |