STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107098142Eukaryotic translation initiation factor 4A1B; Belongs to the DEAD box helicase family. (404 aa)    
Predicted Functional Partners:
LOC107083211
Eukaryotic translation initiation factor 4, gamma 2b.
   
 0.984
eif4g2
Eukaryotic translation initiation factor 4, gamma 2a.
   
 0.984
eif4b
Eukaryotic translation initiation factor 4Bb.
   
 0.984
paip1
Poly(A) binding protein interacting protein 1.
   
 0.980
EIF4G1
Eukaryotic translation initiation factor 4 gamma 1.
   
 0.980
LOC107083370
Uncharacterized protein.
   
 0.980
eif4g3
Eukaryotic translation initiation factor 4 gamma, 3a.
   
 0.980
eif3i
Eukaryotic translation initiation factor 3 subunit I; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation.
   
 
 0.952
Eef1g
Eukaryotic translation elongation factor 1 gamma.
   
 
 0.948
eif3b
Eukaryotic translation initiation factor 3 subunit B; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome; Belongs to the eIF-3 subunit B family.
   
 
 0.931
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.