Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ENSCVAP00000021667 | chmp2a | ENSCVAP00000021667 | ENSCVAP00000026505 | Ubiquitin-like domain-containing protein. | Charged multivesicular body protein 2A. | 0.656 |
ENSCVAP00000021667 | rps27a | ENSCVAP00000021667 | ENSCVAP00000003612 | Ubiquitin-like domain-containing protein. | Ribosomal protein S27a. | 0.996 |
ENSCVAP00000021667 | snf8 | ENSCVAP00000021667 | ENSCVAP00000010095 | Ubiquitin-like domain-containing protein. | Vacuolar-sorting protein SNF8; Component of the endosomal sorting complex required for transport II (ESCRT-II), which is required for multivesicular body (MVB) formation and sorting of endosomal cargo proteins into MVBs. Belongs to the SNF8 family. | 0.669 |
ENSCVAP00000021667 | uba52 | ENSCVAP00000021667 | ENSCVAP00000025559 | Ubiquitin-like domain-containing protein. | Ubiquitin A-52 residue ribosomal protein fusion product 1. | 0.997 |
ENSCVAP00000021667 | vps25 | ENSCVAP00000021667 | ENSCVAP00000024244 | Ubiquitin-like domain-containing protein. | Vacuolar protein sorting 25 homolog. | 0.636 |
ENSCVAP00000021667 | vps28 | ENSCVAP00000021667 | ENSCVAP00000017602 | Ubiquitin-like domain-containing protein. | Vacuolar protein sorting-associated protein 28 homolog; Component of the ESCRT-I complex (endosomal sorting complex required for transport I), a regulator of vesicular trafficking process. | 0.671 |
ENSCVAP00000021667 | vps36 | ENSCVAP00000021667 | ENSCVAP00000031482 | Ubiquitin-like domain-containing protein. | Vacuolar protein sorting 36 homolog. | 0.949 |
LOC107091143 | chmp2a | ENSCVAP00000001884 | ENSCVAP00000026505 | Zgc:153240. | Charged multivesicular body protein 2A. | 0.887 |
LOC107091143 | snf8 | ENSCVAP00000001884 | ENSCVAP00000010095 | Zgc:153240. | Vacuolar-sorting protein SNF8; Component of the endosomal sorting complex required for transport II (ESCRT-II), which is required for multivesicular body (MVB) formation and sorting of endosomal cargo proteins into MVBs. Belongs to the SNF8 family. | 0.936 |
LOC107091143 | vps25 | ENSCVAP00000001884 | ENSCVAP00000024244 | Zgc:153240. | Vacuolar protein sorting 25 homolog. | 0.950 |
LOC107091143 | vps28 | ENSCVAP00000001884 | ENSCVAP00000017602 | Zgc:153240. | Vacuolar protein sorting-associated protein 28 homolog; Component of the ESCRT-I complex (endosomal sorting complex required for transport I), a regulator of vesicular trafficking process. | 0.840 |
LOC107091143 | vps36 | ENSCVAP00000001884 | ENSCVAP00000031482 | Zgc:153240. | Vacuolar protein sorting 36 homolog. | 0.929 |
LOC107102142 | chmp2a | ENSCVAP00000031629 | ENSCVAP00000026505 | Charged multivesicular body protein 6a. | Charged multivesicular body protein 2A. | 0.914 |
LOC107102142 | chmp6 | ENSCVAP00000031629 | ENSCVAP00000027265 | Charged multivesicular body protein 6a. | Charged multivesicular body protein 6. | 0.901 |
LOC107102142 | snf8 | ENSCVAP00000031629 | ENSCVAP00000010095 | Charged multivesicular body protein 6a. | Vacuolar-sorting protein SNF8; Component of the endosomal sorting complex required for transport II (ESCRT-II), which is required for multivesicular body (MVB) formation and sorting of endosomal cargo proteins into MVBs. Belongs to the SNF8 family. | 0.970 |
LOC107102142 | vps25 | ENSCVAP00000031629 | ENSCVAP00000024244 | Charged multivesicular body protein 6a. | Vacuolar protein sorting 25 homolog. | 0.975 |
LOC107102142 | vps28 | ENSCVAP00000031629 | ENSCVAP00000017602 | Charged multivesicular body protein 6a. | Vacuolar protein sorting-associated protein 28 homolog; Component of the ESCRT-I complex (endosomal sorting complex required for transport I), a regulator of vesicular trafficking process. | 0.897 |
LOC107102142 | vps36 | ENSCVAP00000031629 | ENSCVAP00000031482 | Charged multivesicular body protein 6a. | Vacuolar protein sorting 36 homolog. | 0.944 |
chmp2a | ENSCVAP00000021667 | ENSCVAP00000026505 | ENSCVAP00000021667 | Charged multivesicular body protein 2A. | Ubiquitin-like domain-containing protein. | 0.656 |
chmp2a | LOC107091143 | ENSCVAP00000026505 | ENSCVAP00000001884 | Charged multivesicular body protein 2A. | Zgc:153240. | 0.887 |
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