STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TrispH2_012201Nephrocystin-3. (868 aa)    
Predicted Functional Partners:
TrispH2_000237
RNA polymerase-associated protein LEO1.
    
 0.847
TrispH2_010814
Cell division cycle protein 16-like protein.
    
 0.667
TrispH2_003102
Parafibromin.
    
 0.667
TrispH2_007226
Anaphase-promoting complex subunit 1.
    
 0.666
TrispH2_004159
Anaphase-promoting complex subunit 5.
    
 0.665
TrispH2_006275
Intraflagellar transport protein 57-like protein.
    
 0.664
TrispH2_000975
Intraflagellar transport protein 81-like protein.
    
 0.664
TrispH2_001442
Intraflagellar transport protein 52-like protein.
    
 0.664
TrispH2_004934
Anaphase-promoting complex subunit 4.
    
 0.663
TrispH2_004902
Intraflagellar transport protein 172-like protein.
    
 0.659
Your Current Organism:
Trichoplax sp. H2
NCBI taxonomy Id: 287889
Other names: T. sp. H2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.