Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
TrispH2_001186 | TrispH2_004244 | A0A369SIP5 | A0A369S9H8 | Centrosomal protein of 85 kDa. | Plexin-A2. | 0.839 |
TrispH2_001186 | TrispH2_004246 | A0A369SIP5 | A0A369SC16 | Centrosomal protein of 85 kDa. | Plexin A3. | 0.839 |
TrispH2_001186 | TrispH2_005116 | A0A369SIP5 | A0A369S5Z1 | Centrosomal protein of 85 kDa. | Fibrocystin-L. | 0.839 |
TrispH2_001186 | TrispH2_011911 | A0A369SIP5 | A0A369RMW5 | Centrosomal protein of 85 kDa. | Cubilin. | 0.644 |
TrispH2_001997 | TrispH2_011911 | A0A369SI10 | A0A369RMW5 | Arginine/serine-rich coiled-coil protein 2. | Cubilin. | 0.630 |
TrispH2_002772 | TrispH2_004244 | A0A369SFC4 | A0A369S9H8 | Semaphorin-5A. | Plexin-A2. | 0.880 |
TrispH2_002772 | TrispH2_004246 | A0A369SFC4 | A0A369SC16 | Semaphorin-5A. | Plexin A3. | 0.880 |
TrispH2_002772 | TrispH2_005116 | A0A369SFC4 | A0A369S5Z1 | Semaphorin-5A. | Fibrocystin-L. | 0.839 |
TrispH2_002772 | TrispH2_011911 | A0A369SFC4 | A0A369RMW5 | Semaphorin-5A. | Cubilin. | 0.644 |
TrispH2_002776 | TrispH2_004244 | A0A369SGE8 | A0A369S9H8 | Semaphorin-5A; Belongs to the semaphorin family. | Plexin-A2. | 0.880 |
TrispH2_002776 | TrispH2_004246 | A0A369SGE8 | A0A369SC16 | Semaphorin-5A; Belongs to the semaphorin family. | Plexin A3. | 0.880 |
TrispH2_002776 | TrispH2_005116 | A0A369SGE8 | A0A369S5Z1 | Semaphorin-5A; Belongs to the semaphorin family. | Fibrocystin-L. | 0.839 |
TrispH2_002776 | TrispH2_011911 | A0A369SGE8 | A0A369RMW5 | Semaphorin-5A; Belongs to the semaphorin family. | Cubilin. | 0.644 |
TrispH2_003650 | TrispH2_011911 | A0A369S9Q1 | A0A369RMW5 | SCL-interrupting locus protein-like protein. | Cubilin. | 0.630 |
TrispH2_003737 | TrispH2_011911 | A0A369SCQ1 | A0A369RMW5 | Receptor protein-tyrosine kinase. | Cubilin. | 0.630 |
TrispH2_004244 | TrispH2_001186 | A0A369S9H8 | A0A369SIP5 | Plexin-A2. | Centrosomal protein of 85 kDa. | 0.839 |
TrispH2_004244 | TrispH2_002772 | A0A369S9H8 | A0A369SFC4 | Plexin-A2. | Semaphorin-5A. | 0.880 |
TrispH2_004244 | TrispH2_002776 | A0A369S9H8 | A0A369SGE8 | Plexin-A2. | Semaphorin-5A; Belongs to the semaphorin family. | 0.880 |
TrispH2_004244 | TrispH2_011911 | A0A369S9H8 | A0A369RMW5 | Plexin-A2. | Cubilin. | 0.653 |
TrispH2_004246 | TrispH2_001186 | A0A369SC16 | A0A369SIP5 | Plexin A3. | Centrosomal protein of 85 kDa. | 0.839 |
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