Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
TrispH2_001505 | TrispH2_011924 | A0A369SJ05 | A0A369RN50 | Leucine-rich repeat-containing protein 14. | UDP-glucuronosyltransferase; Belongs to the UDP-glycosyltransferase family. | 0.402 |
TrispH2_005414 | TrispH2_011924 | A0A369S6D9 | A0A369RN50 | UDP-glucose 6-dehydrogenase; Involved in the biosynthesis of glycosaminoglycans; hyaluronan, chondroitin sulfate, and heparan sulfate. Belongs to the UDP-glucose/GDP-mannose dehydrogenase family. | UDP-glucuronosyltransferase; Belongs to the UDP-glycosyltransferase family. | 0.403 |
TrispH2_006591 | TrispH2_009593 | A0A369S737 | A0A369RXK0 | Galactocerebrosidase. | Ceramide glucosyltransferase. | 0.805 |
TrispH2_006591 | TrispH2_011924 | A0A369S737 | A0A369RN50 | Galactocerebrosidase. | UDP-glucuronosyltransferase; Belongs to the UDP-glycosyltransferase family. | 0.406 |
TrispH2_009593 | TrispH2_006591 | A0A369RXK0 | A0A369S737 | Ceramide glucosyltransferase. | Galactocerebrosidase. | 0.805 |
TrispH2_009593 | TrispH2_011924 | A0A369RXK0 | A0A369RN50 | Ceramide glucosyltransferase. | UDP-glucuronosyltransferase; Belongs to the UDP-glycosyltransferase family. | 0.402 |
TrispH2_011924 | TrispH2_001505 | A0A369RN50 | A0A369SJ05 | UDP-glucuronosyltransferase; Belongs to the UDP-glycosyltransferase family. | Leucine-rich repeat-containing protein 14. | 0.402 |
TrispH2_011924 | TrispH2_005414 | A0A369RN50 | A0A369S6D9 | UDP-glucuronosyltransferase; Belongs to the UDP-glycosyltransferase family. | UDP-glucose 6-dehydrogenase; Involved in the biosynthesis of glycosaminoglycans; hyaluronan, chondroitin sulfate, and heparan sulfate. Belongs to the UDP-glucose/GDP-mannose dehydrogenase family. | 0.403 |
TrispH2_011924 | TrispH2_006591 | A0A369RN50 | A0A369S737 | UDP-glucuronosyltransferase; Belongs to the UDP-glycosyltransferase family. | Galactocerebrosidase. | 0.406 |
TrispH2_011924 | TrispH2_009593 | A0A369RN50 | A0A369RXK0 | UDP-glucuronosyltransferase; Belongs to the UDP-glycosyltransferase family. | Ceramide glucosyltransferase. | 0.402 |