STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TrispH2_012106Uncharacterized protein C16orf52-like protein B. (106 aa)    
Predicted Functional Partners:
TrispH2_007309
Procollagen-lysine,2-oxoglutarate 5-dioxygenase 1.
   
 0.858
TrispH2_003458
RING finger protein 157.
      
 0.599
TrispH2_000206
V-type proton ATPase subunit; Subunit of the integral membrane V0 complex of vacuolar ATPase. Vacuolar ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells, thus providing most of the energy required for transport processes in the vacuolar system. Belongs to the V-ATPase V0D/AC39 subunit family.
     
 0.508
TrispH2_006993
Frizzled-10; Belongs to the G-protein coupled receptor Fz/Smo family.
    
  0.488
TrispH2_003359
Secreted frizzled-related protein 3.
    
  0.488
TrispH2_001227
Frizzled-1; Belongs to the G-protein coupled receptor Fz/Smo family.
    
  0.488
Your Current Organism:
Trichoplax sp. H2
NCBI taxonomy Id: 287889
Other names: T. sp. H2
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