STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TrispH2_011155Protein Red. (529 aa)    
Predicted Functional Partners:
TrispH2_007013
WD40 repeat-containing protein SMU1.
   
 0.997
TrispH2_010711
Pre-mRNA-processing factor 6.
   
 0.952
TrispH2_005170
Microfibrillar-associated protein 1.
   
  0.943
TrispH2_007357
Pre-mRNA-splicing factor 38A.
   
 0.910
TrispH2_008586
116 kDa U5 small nuclear ribonucleoprotein component.
    
 
 0.861
TrispH2_007069
Zinc finger matrin-type protein 2.
    
  0.852
TrispH2_006446
Thioredoxin-like protein; Plays role in pre-mRNA splicing. Belongs to the DIM1 family.
    
  0.852
TrispH2_005642
Splicing factor 3B subunit 3.
    
   0.842
TrispH2_002599
Thioredoxin-like protein; Plays role in pre-mRNA splicing. Belongs to the DIM1 family.
    
  0.726
TrispH2_010253
U4/U6 small nuclear ribonucleoprotein Prp3.
   
   0.721
Your Current Organism:
Trichoplax sp. H2
NCBI taxonomy Id: 287889
Other names: T. sp. H2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.