Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
TrispH2_000746 | TrispH2_001375 | A0A369SM60 | A0A369SH19 | Ribosome biogenesis protein BRX1-like protein. | Putative rRNA-processing protein EBP2. | 0.999 |
TrispH2_000746 | TrispH2_003719 | A0A369SM60 | A0A369SCC9 | Ribosome biogenesis protein BRX1-like protein. | Ribosome production factor 2-like protein. | 0.999 |
TrispH2_000746 | TrispH2_004295 | A0A369SM60 | A0A369SA00 | Ribosome biogenesis protein BRX1-like protein. | RNA helicase. | 0.992 |
TrispH2_000746 | TrispH2_004660 | A0A369SM60 | A0A369SBE1 | Ribosome biogenesis protein BRX1-like protein. | Nucleolar complex protein 2-like protein. | 0.996 |
TrispH2_000746 | TrispH2_004672 | A0A369SM60 | A0A369SBH8 | Ribosome biogenesis protein BRX1-like protein. | 60S ribosome subunit biogenesis protein NIP7 homolog; Required for proper 34S pre-rRNA processing and 60S ribosome subunit assembly; Belongs to the NIP7 family. | 0.999 |
TrispH2_000746 | TrispH2_004733 | A0A369SM60 | A0A369SA91 | Ribosome biogenesis protein BRX1-like protein. | Guanine nucleotide-binding protein-like 3-like protein. | 0.988 |
TrispH2_000746 | TrispH2_006247 | A0A369SM60 | A0A369S211 | Ribosome biogenesis protein BRX1-like protein. | Ribosomal L1 domain-containing protein 1. | 0.993 |
TrispH2_000746 | TrispH2_008290 | A0A369SM60 | A0A369S1E1 | Ribosome biogenesis protein BRX1-like protein. | Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family. | 0.961 |
TrispH2_000746 | TrispH2_010777 | A0A369SM60 | A0A369RRU3 | Ribosome biogenesis protein BRX1-like protein. | Ribosome production factor 1. | 0.996 |
TrispH2_000746 | TrispH2_010890 | A0A369SM60 | A0A369RRV5 | Ribosome biogenesis protein BRX1-like protein. | MKI67 FHA domain-interacting nucleolar phosphoprotein-like. | 0.999 |
TrispH2_001375 | TrispH2_000746 | A0A369SH19 | A0A369SM60 | Putative rRNA-processing protein EBP2. | Ribosome biogenesis protein BRX1-like protein. | 0.999 |
TrispH2_001375 | TrispH2_003719 | A0A369SH19 | A0A369SCC9 | Putative rRNA-processing protein EBP2. | Ribosome production factor 2-like protein. | 0.997 |
TrispH2_001375 | TrispH2_004295 | A0A369SH19 | A0A369SA00 | Putative rRNA-processing protein EBP2. | RNA helicase. | 0.991 |
TrispH2_001375 | TrispH2_004660 | A0A369SH19 | A0A369SBE1 | Putative rRNA-processing protein EBP2. | Nucleolar complex protein 2-like protein. | 0.996 |
TrispH2_001375 | TrispH2_004672 | A0A369SH19 | A0A369SBH8 | Putative rRNA-processing protein EBP2. | 60S ribosome subunit biogenesis protein NIP7 homolog; Required for proper 34S pre-rRNA processing and 60S ribosome subunit assembly; Belongs to the NIP7 family. | 0.993 |
TrispH2_001375 | TrispH2_004733 | A0A369SH19 | A0A369SA91 | Putative rRNA-processing protein EBP2. | Guanine nucleotide-binding protein-like 3-like protein. | 0.999 |
TrispH2_001375 | TrispH2_006247 | A0A369SH19 | A0A369S211 | Putative rRNA-processing protein EBP2. | Ribosomal L1 domain-containing protein 1. | 0.996 |
TrispH2_001375 | TrispH2_008290 | A0A369SH19 | A0A369S1E1 | Putative rRNA-processing protein EBP2. | Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family. | 0.986 |
TrispH2_001375 | TrispH2_010777 | A0A369SH19 | A0A369RRU3 | Putative rRNA-processing protein EBP2. | Ribosome production factor 1. | 0.993 |
TrispH2_001375 | TrispH2_010890 | A0A369SH19 | A0A369RRV5 | Putative rRNA-processing protein EBP2. | MKI67 FHA domain-interacting nucleolar phosphoprotein-like. | 0.998 |
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