Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
TrispH2_000144 | TrispH2_000491 | A0A369SL16 | A0A369SSL3 | Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family. | Low-density lipoprotein receptor-related protein 4. | 0.819 |
TrispH2_000144 | TrispH2_006993 | A0A369SL16 | A0A369S4J8 | Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family. | Frizzled-10; Belongs to the G-protein coupled receptor Fz/Smo family. | 0.941 |
TrispH2_000144 | TrispH2_007645 | A0A369SL16 | A0A369RWB7 | Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family. | Synaptotagmin-1. | 0.505 |
TrispH2_000144 | TrispH2_008466 | A0A369SL16 | A0A369S067 | Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family. | Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction. | 0.565 |
TrispH2_000144 | TrispH2_011048 | A0A369SL16 | A0A369RS68 | Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family. | Tachykinin-like peptides receptor 86C. | 0.742 |
TrispH2_000491 | TrispH2_000144 | A0A369SSL3 | A0A369SL16 | Low-density lipoprotein receptor-related protein 4. | Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family. | 0.819 |
TrispH2_000491 | TrispH2_006993 | A0A369SSL3 | A0A369S4J8 | Low-density lipoprotein receptor-related protein 4. | Frizzled-10; Belongs to the G-protein coupled receptor Fz/Smo family. | 0.793 |
TrispH2_000491 | TrispH2_007645 | A0A369SSL3 | A0A369RWB7 | Low-density lipoprotein receptor-related protein 4. | Synaptotagmin-1. | 0.572 |
TrispH2_000491 | TrispH2_010556 | A0A369SSL3 | A0A369RTS8 | Low-density lipoprotein receptor-related protein 4. | Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family. | 0.807 |
TrispH2_000491 | TrispH2_011048 | A0A369SSL3 | A0A369RS68 | Low-density lipoprotein receptor-related protein 4. | Tachykinin-like peptides receptor 86C. | 0.614 |
TrispH2_002763 | TrispH2_011048 | A0A369SGQ5 | A0A369RS68 | Succinate dehydrogenase assembly factor 3, mitochondrial. | Tachykinin-like peptides receptor 86C. | 0.670 |
TrispH2_004132 | TrispH2_007191 | A0A369SAE9 | A0A369S025 | Orexin receptor type 2. | Guanine nucleotide-binding protein subunit beta-5. | 0.474 |
TrispH2_004132 | TrispH2_009140 | A0A369SAE9 | A0A369RY02 | Orexin receptor type 2. | Guanine nucleotide-binding protein subunit beta-1. | 0.474 |
TrispH2_004132 | TrispH2_011048 | A0A369SAE9 | A0A369RS68 | Orexin receptor type 2. | Tachykinin-like peptides receptor 86C. | 0.613 |
TrispH2_006993 | TrispH2_000144 | A0A369S4J8 | A0A369SL16 | Frizzled-10; Belongs to the G-protein coupled receptor Fz/Smo family. | Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family. | 0.941 |
TrispH2_006993 | TrispH2_000491 | A0A369S4J8 | A0A369SSL3 | Frizzled-10; Belongs to the G-protein coupled receptor Fz/Smo family. | Low-density lipoprotein receptor-related protein 4. | 0.793 |
TrispH2_006993 | TrispH2_007191 | A0A369S4J8 | A0A369S025 | Frizzled-10; Belongs to the G-protein coupled receptor Fz/Smo family. | Guanine nucleotide-binding protein subunit beta-5. | 0.691 |
TrispH2_006993 | TrispH2_007645 | A0A369S4J8 | A0A369RWB7 | Frizzled-10; Belongs to the G-protein coupled receptor Fz/Smo family. | Synaptotagmin-1. | 0.589 |
TrispH2_006993 | TrispH2_008466 | A0A369S4J8 | A0A369S067 | Frizzled-10; Belongs to the G-protein coupled receptor Fz/Smo family. | Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction. | 0.667 |
TrispH2_006993 | TrispH2_009140 | A0A369S4J8 | A0A369RY02 | Frizzled-10; Belongs to the G-protein coupled receptor Fz/Smo family. | Guanine nucleotide-binding protein subunit beta-1. | 0.691 |
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