STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TrispH2_010055tRNA modification GTPase GTPBP3, mitochondrial; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family. (445 aa)    
Predicted Functional Partners:
TrispH2_000281
Protein MTO1-like protein, mitochondrial.
 
 0.988
TrispH2_008554
Endoplasmic reticulum-Golgi intermediate compartment protein 3.
  
 0.964
TrispH2_000905
Endoplasmic reticulum-Golgi intermediate compartment protein 2.
  
 0.964
TrispH2_000103
Mitochondrial tRNA-specific 2-thiouridylase 1.
  
 0.944
TrispH2_001934
GTP-binding protein 8.
    
 
 0.943
TrispH2_001309
39S ribosomal protein L15, mitochondrial.
    
 
 0.938
TrispH2_007659
39S ribosomal protein L11, mitochondrial; Belongs to the universal ribosomal protein uL11 family.
    
 
 0.934
TrispH2_004498
39S ribosomal protein L13, mitochondrial.
    
 
 0.891
TrispH2_002182
39S ribosomal protein L21, mitochondrial.
   
 
 0.891
TrispH2_000514
Mitochondrial GTPase 1; Plays a role in the regulation of the mitochondrial ribosome assembly and of translational activity. Displays mitochondrial GTPase activity; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily.
  
 
 0.887
Your Current Organism:
Trichoplax sp. H2
NCBI taxonomy Id: 287889
Other names: T. sp. H2
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