STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TrispH2_010615Diisopropyl-fluorophosphatase. (303 aa)    
Predicted Functional Partners:
TrispH2_007330
Exosome component 10.
   
 
 0.774
TrispH2_007959
CCA tRNA nucleotidyltransferase 1, mitochondrial.
  
 0.745
TrispH2_003938
Elongation factor Ts, mitochondrial; Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome. Belongs to the EF-Ts family.
  
  
 0.740
TrispH2_007276
Regucalcin.
  
  
 
0.738
TrispH2_010849
Eukaryotic translation initiation factor 5B.
  
  
 0.714
TrispH2_004084
Translation initiation factor IF-2, mitochondrial.
  
  
 0.714
TrispH2_011133
Exosome complex exonuclease RRP44; Belongs to the RNR ribonuclease family.
   
 
 0.706
TrispH2_009534
DIS3-like exonuclease 2.
   
 
 0.706
TrispH2_010867
39S ribosomal protein L20, mitochondrial; Belongs to the bacterial ribosomal protein bL20 family.
  
  
 0.692
TrispH2_009466
40S ribosomal protein S14b; Belongs to the universal ribosomal protein uS11 family.
   
  
 0.688
Your Current Organism:
Trichoplax sp. H2
NCBI taxonomy Id: 287889
Other names: T. sp. H2
Server load: low (14%) [HD]