STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TrispH2_009777Protein FAM98A. (399 aa)    
Predicted Functional Partners:
TrispH2_009410
UPF0568 protein C14orf166-like protein.
    
 0.943
TrispH2_003799
ATP-dependent RNA helicase DDX1.
    
 0.942
TrispH2_000086
RNA-splicing ligase RtcB homolog; Catalytic subunit of the tRNA-splicing ligase complex that acts by directly joining spliced tRNA halves to mature-sized tRNAs by incorporating the precursor-derived splice junction phosphate into the mature tRNA as a canonical 3',5'-phosphodiester. May act as an RNA ligase with broad substrate specificity, and may function toward other RNAs; Belongs to the RtcB family.
    
 0.924
TrispH2_005053
Protein unc-79-like protein.
    
 0.889
TrispH2_004289
Leucine-rich repeat serine/threonine-protein kinase 1.
    
 0.794
TrispH2_000666
Regulating synaptic membrane exocytosis protein 2.
    
  0.787
TrispH2_000541
Regulating synaptic membrane exocytosis protein 2.
    
  0.787
TrispH2_009158
Adenylate kinase 9.
    
  0.746
TrispH2_010099
E3 SUMO-protein ligase RanBP2.
    
 0.730
TrispH2_009349
E3 SUMO-protein ligase RanBP2.
    
 0.730
Your Current Organism:
Trichoplax sp. H2
NCBI taxonomy Id: 287889
Other names: T. sp. H2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.