STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TrispH2_008996Synaptotagmin-like protein 3. (612 aa)    
Predicted Functional Partners:
TrispH2_009084
Stonin-2.
    
 0.693
TrispH2_006861
Syntaxin; Belongs to the syntaxin family.
    
 0.675
TrispH2_006862
Syntaxin; Belongs to the syntaxin family.
    
 0.675
TrispH2_004549
Syntaxin-1A; Belongs to the syntaxin family.
    
 0.675
TrispH2_006810
Ras-related protein Rab-3A.
   
 0.666
TrispH2_006809
Ras-related protein Rab-3C.
   
 0.666
TrispH2_001856
CD2-associated protein.
  
  0.657
TrispH2_005809
Uncharacterized protein.
    
 0.655
TrispH2_005280
Synaptobrevin.
    
 0.655
TrispH2_004541
Vesicle-associated membrane protein 2.
    
 0.655
Your Current Organism:
Trichoplax sp. H2
NCBI taxonomy Id: 287889
Other names: T. sp. H2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.