STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TrispH2_008380D-aminoacyl-tRNA deacylase. (151 aa)    
Predicted Functional Partners:
TrispH2_004289
Leucine-rich repeat serine/threonine-protein kinase 1.
   
 0.769
TrispH2_003293
Inactive tyrosine-protein kinase 7; Belongs to the protein kinase superfamily. Tyr protein kinase family.
    
  0.662
TrispH2_005360
Receptor-interacting serine/threonine-protein kinase 4.
   
 0.655
TrispH2_005358
E3 ubiquitin-protein ligase MIB2.
   
 0.655
TrispH2_004844
BRCA1-associated RING domain protein 1.
   
 0.650
TrispH2_011892
SCAN domain-containing protein 3.
    
 0.649
TrispH2_001744
Peripheral plasma membrane protein CASK; Belongs to the MAGUK family.
    
  0.644
TrispH2_010485
Skp1-related protein; Belongs to the SKP1 family.
    
  0.639
TrispH2_009555
Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.
 
  
  0.623
TrispH2_001565
Tonsoku-like protein.
   
 0.603
Your Current Organism:
Trichoplax sp. H2
NCBI taxonomy Id: 287889
Other names: T. sp. H2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.