STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TrispH2_007447Putative caffeoyl-CoA O-methyltransferase 2. (216 aa)    
Predicted Functional Partners:
TrispH2_002079
S-adenosylmethionine synthase; Catalyzes the formation of S-adenosylmethionine from methionine and ATP.
  
 
 0.703
TrispH2_007235
Thymidine kinase.
  
 
  0.687
TrispH2_007894
Aromatic-L-amino-acid decarboxylase.
   
 
 0.601
TrispH2_001355
D-arabinitol dehydrogenase 1.
   
 
  0.584
TrispH2_009631
NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial.
  
 
  0.581
TrispH2_006353
GDH/6PGL endoplasmic bifunctional protein.
    
  0.550
TrispH2_000632
Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine.
     
 0.538
TrispH2_006495
Uridine kinase; Belongs to the uridine kinase family.
  
 
  0.537
TrispH2_003068
Uridine-cytidine kinase 2.
  
 
  0.537
TrispH2_002540
Armadillo segment polarity protein.
  
 
  0.537
Your Current Organism:
Trichoplax sp. H2
NCBI taxonomy Id: 287889
Other names: T. sp. H2
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