STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TrispH2_008157Carbonic anhydrase; Belongs to the alpha-carbonic anhydrase family. (514 aa)    
Predicted Functional Partners:
TrispH2_003076
60S ribosomal protein L5.
    
 
 0.633
TrispH2_003719
Ribosome production factor 2-like protein.
   
 
 0.625
TrispH2_008290
Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family.
   
 
 0.562
TrispH2_010112
Carbonic anhydrase; Reversible hydration of carbon dioxide. Belongs to the beta-class carbonic anhydrase family.
     
 0.556
TrispH2_008623
60S ribosomal protein L11; Belongs to the universal ribosomal protein uL5 family.
    
 
 0.551
TrispH2_003045
Suppressor of SWI4 1-like protein.
   
    0.516
TrispH2_007636
Glutamate-rich WD repeat-containing protein 1.
   
  
 0.486
TrispH2_008784
Putative RNA-binding protein.
   
 
 0.483
TrispH2_002365
RNA-binding protein 34.
   
 
 0.471
TrispH2_003139
WD repeat-containing protein 43.
   
    0.469
Your Current Organism:
Trichoplax sp. H2
NCBI taxonomy Id: 287889
Other names: T. sp. H2
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