Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
TrispH2_002365 | TrispH2_003045 | A0A369SDD8 | A0A369SD89 | RNA-binding protein 34. | Suppressor of SWI4 1-like protein. | 0.802 |
TrispH2_002365 | TrispH2_003139 | A0A369SDD8 | A0A369SG64 | RNA-binding protein 34. | WD repeat-containing protein 43. | 0.561 |
TrispH2_002365 | TrispH2_003719 | A0A369SDD8 | A0A369SCC9 | RNA-binding protein 34. | Ribosome production factor 2-like protein. | 0.966 |
TrispH2_002365 | TrispH2_007636 | A0A369SDD8 | A0A369RX14 | RNA-binding protein 34. | Glutamate-rich WD repeat-containing protein 1. | 0.629 |
TrispH2_002365 | TrispH2_008157 | A0A369SDD8 | A0A369S300 | RNA-binding protein 34. | Carbonic anhydrase; Belongs to the alpha-carbonic anhydrase family. | 0.471 |
TrispH2_002365 | TrispH2_008290 | A0A369SDD8 | A0A369S1E1 | RNA-binding protein 34. | Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family. | 0.730 |
TrispH2_002365 | TrispH2_008784 | A0A369SDD8 | A0A369S071 | RNA-binding protein 34. | Putative RNA-binding protein. | 0.604 |
TrispH2_003045 | TrispH2_002365 | A0A369SD89 | A0A369SDD8 | Suppressor of SWI4 1-like protein. | RNA-binding protein 34. | 0.802 |
TrispH2_003045 | TrispH2_003139 | A0A369SD89 | A0A369SG64 | Suppressor of SWI4 1-like protein. | WD repeat-containing protein 43. | 0.799 |
TrispH2_003045 | TrispH2_003719 | A0A369SD89 | A0A369SCC9 | Suppressor of SWI4 1-like protein. | Ribosome production factor 2-like protein. | 0.966 |
TrispH2_003045 | TrispH2_007636 | A0A369SD89 | A0A369RX14 | Suppressor of SWI4 1-like protein. | Glutamate-rich WD repeat-containing protein 1. | 0.995 |
TrispH2_003045 | TrispH2_008157 | A0A369SD89 | A0A369S300 | Suppressor of SWI4 1-like protein. | Carbonic anhydrase; Belongs to the alpha-carbonic anhydrase family. | 0.516 |
TrispH2_003045 | TrispH2_008290 | A0A369SD89 | A0A369S1E1 | Suppressor of SWI4 1-like protein. | Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family. | 0.928 |
TrispH2_003045 | TrispH2_008784 | A0A369SD89 | A0A369S071 | Suppressor of SWI4 1-like protein. | Putative RNA-binding protein. | 0.794 |
TrispH2_003076 | TrispH2_003719 | A0A369SD28 | A0A369SCC9 | 60S ribosomal protein L5. | Ribosome production factor 2-like protein. | 0.980 |
TrispH2_003076 | TrispH2_007636 | A0A369SD28 | A0A369RX14 | 60S ribosomal protein L5. | Glutamate-rich WD repeat-containing protein 1. | 0.520 |
TrispH2_003076 | TrispH2_008157 | A0A369SD28 | A0A369S300 | 60S ribosomal protein L5. | Carbonic anhydrase; Belongs to the alpha-carbonic anhydrase family. | 0.633 |
TrispH2_003076 | TrispH2_008290 | A0A369SD28 | A0A369S1E1 | 60S ribosomal protein L5. | Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family. | 0.960 |
TrispH2_003076 | TrispH2_008623 | A0A369SD28 | A0A369RWR9 | 60S ribosomal protein L5. | 60S ribosomal protein L11; Belongs to the universal ribosomal protein uL5 family. | 0.999 |
TrispH2_003139 | TrispH2_002365 | A0A369SG64 | A0A369SDD8 | WD repeat-containing protein 43. | RNA-binding protein 34. | 0.561 |
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