STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TrispH2_006182Protein Njmu-R1. (322 aa)    
Predicted Functional Partners:
TrispH2_000205
Vacuolar protein sorting-associated protein 4B; Belongs to the AAA ATPase family.
    
 0.974
TrispH2_002936
Vacuolar protein-sorting-associated protein 25.
   
 0.965
TrispH2_004816
Vacuolar-sorting protein SNF8; Component of the endosomal sorting complex required for transport II (ESCRT-II), which is required for multivesicular body (MVB) formation and sorting of endosomal cargo proteins into MVBs. Belongs to the SNF8 family.
    
 0.962
TrispH2_008356
Vacuolar protein-sorting-associated protein 36.
    
 0.961
TrispH2_001231
Charged multivesicular body protein 2a.
   
 0.939
TrispH2_005146
Charged multivesicular body protein 3.
    
 0.933
TrispH2_003814
Charged multivesicular body protein 4b.
    
 0.897
TrispH2_000657
Transmembrane 9 superfamily member; Belongs to the nonaspanin (TM9SF) (TC 9.A.2) family.
    
 0.897
TrispH2_009430
Charged multivesicular body protein 5.
   
 0.893
TrispH2_006487
Protein FAM91A1.
    
 
 0.863
Your Current Organism:
Trichoplax sp. H2
NCBI taxonomy Id: 287889
Other names: T. sp. H2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.