STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TrispH2_008419Contactin-6. (1147 aa)    
Predicted Functional Partners:
TrispH2_000073
Receptor-type tyrosine-protein phosphatase gamma.
    
 
 0.808
TrispH2_010638
Protein sax-3.
  
0.677
TrispH2_010641
Neural cell adhesion molecule 2.
  
0.670
TrispH2_002868
Contactin-associated protein-like 5.
  
 
 0.662
TrispH2_005166
Contactin-associated protein-like 5.
  
 
 0.657
TrispH2_008811
Contactin-associated protein-like 5.
  
 
 0.631
TrispH2_011163
Ankyrin-3.
    
 0.619
TrispH2_008668
Ankyrin-3.
    
 0.619
TrispH2_006108
Transient receptor potential cation channel subfamily A member 1.
    
 0.619
TrispH2_006983
Ankyrin-3.
    
 0.619
Your Current Organism:
Trichoplax sp. H2
NCBI taxonomy Id: 287889
Other names: T. sp. H2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.