Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
TrispH2_000241 | TrispH2_000722 | A0A369SLH0 | A0A369SL56 | AN1-type zinc finger protein 4. | 40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family. | 0.996 |
TrispH2_000241 | TrispH2_001318 | A0A369SLH0 | A0A369SJT0 | AN1-type zinc finger protein 4. | Ubiquitin carboxyl-terminal hydrolase. | 0.843 |
TrispH2_000241 | TrispH2_001384 | A0A369SLH0 | A0A369SI97 | AN1-type zinc finger protein 4. | Cyclin-G-associated kinase. | 0.933 |
TrispH2_000241 | TrispH2_004085 | A0A369SLH0 | A0A369S825 | AN1-type zinc finger protein 4. | Ubiquitin-40S ribosomal protein S27a. | 0.999 |
TrispH2_000241 | TrispH2_004218 | A0A369SLH0 | A0A369SB29 | AN1-type zinc finger protein 4. | Ubiquitin carboxyl-terminal hydrolase. | 0.843 |
TrispH2_000241 | TrispH2_004323 | A0A369SLH0 | A0A369SCF8 | AN1-type zinc finger protein 4. | UBX domain-containing protein 7. | 0.994 |
TrispH2_000241 | TrispH2_006305 | A0A369SLH0 | A0A369S4F7 | AN1-type zinc finger protein 4. | Ubiquitin-60S ribosomal protein L40. | 0.659 |
TrispH2_000241 | TrispH2_006626 | A0A369SLH0 | A0A369S3T0 | AN1-type zinc finger protein 4. | Mitochondrial fission process protein 1. | 0.577 |
TrispH2_000722 | TrispH2_000241 | A0A369SL56 | A0A369SLH0 | 40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family. | AN1-type zinc finger protein 4. | 0.996 |
TrispH2_000722 | TrispH2_001318 | A0A369SL56 | A0A369SJT0 | 40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family. | Ubiquitin carboxyl-terminal hydrolase. | 0.841 |
TrispH2_000722 | TrispH2_001384 | A0A369SL56 | A0A369SI97 | 40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family. | Cyclin-G-associated kinase. | 0.862 |
TrispH2_000722 | TrispH2_004085 | A0A369SL56 | A0A369S825 | 40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family. | Ubiquitin-40S ribosomal protein S27a. | 0.999 |
TrispH2_000722 | TrispH2_004218 | A0A369SL56 | A0A369SB29 | 40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family. | Ubiquitin carboxyl-terminal hydrolase. | 0.841 |
TrispH2_000722 | TrispH2_004323 | A0A369SL56 | A0A369SCF8 | 40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family. | UBX domain-containing protein 7. | 0.993 |
TrispH2_000722 | TrispH2_005050 | A0A369SL56 | A0A369S8V6 | 40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family. | Mitochondrial import receptor subunit TOM20-like protein B. | 0.580 |
TrispH2_000722 | TrispH2_006305 | A0A369SL56 | A0A369S4F7 | 40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family. | Ubiquitin-60S ribosomal protein L40. | 0.887 |
TrispH2_000722 | TrispH2_006626 | A0A369SL56 | A0A369S3T0 | 40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family. | Mitochondrial fission process protein 1. | 0.571 |
TrispH2_001318 | TrispH2_000241 | A0A369SJT0 | A0A369SLH0 | Ubiquitin carboxyl-terminal hydrolase. | AN1-type zinc finger protein 4. | 0.843 |
TrispH2_001318 | TrispH2_000722 | A0A369SJT0 | A0A369SL56 | Ubiquitin carboxyl-terminal hydrolase. | 40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family. | 0.841 |
TrispH2_001318 | TrispH2_004085 | A0A369SJT0 | A0A369S825 | Ubiquitin carboxyl-terminal hydrolase. | Ubiquitin-40S ribosomal protein S27a. | 0.929 |
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