STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TrispH2_005551Pre-mRNA-processing factor 40-like protein A. (680 aa)    
Predicted Functional Partners:
TrispH2_008186
Huntingtin.
    
 0.855
TrispH2_008055
TNF receptor-associated factor 6-A.
    
 0.817
TrispH2_001440
Nucleoprotein TPR.
   
  0.814
TrispH2_007947
Splicing factor 1.
   
 0.795
TrispH2_003417
Dual specificity mitogen-activated protein kinase kinase 4.
    
 0.771
TrispH2_006728
U2 snRNP-associated SURP motif-containing protein.
   
 
 0.770
TrispH2_004400
Ubiquitin-conjugating enzyme E2 N; Belongs to the ubiquitin-conjugating enzyme family.
   
 0.762
TrispH2_010884
TGF-beta-activated kinase 1 and MAP3K7-binding protein 1.
   
 0.749
TrispH2_003505
TGF-beta-activated kinase 1 and MAP3K7-binding protein 1.
   
 0.749
TrispH2_001069
Serine/arginine repetitive matrix protein 1.
   
 0.741
Your Current Organism:
Trichoplax sp. H2
NCBI taxonomy Id: 287889
Other names: T. sp. H2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.