STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TrispH2_005133STAGA complex 65 subunit gamma. (436 aa)    
Predicted Functional Partners:
TrispH2_001184
Transcription initiation protein SPT3-like protein.
    
 0.977
TrispH2_003314
TAF6-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 6L.
    
 0.975
TrispH2_001187
Transcription factor SPT20-like protein.
    
 0.975
TrispH2_005449
Transcription initiation factor TFIID subunit 10; TFIID is a multimeric protein complex that plays a central role in mediating promoter responses to various activators and repressors; Belongs to the TAF10 family.
    
 0.973
TrispH2_009195
Transcription initiation factor TFIID subunit 12.
    
 0.965
TrispH2_005715
Transformation/transcription domain-associated protein; Belongs to the PI3/PI4-kinase family.
    
 0.964
TrispH2_001737
Transcription initiation factor TFIID subunit 9.
    
 0.942
TrispH2_010374
Transcription initiation factor TFIID subunit 5.
    
 0.937
TrispH2_009429
Ataxin-7-like protein 3.
    
 0.914
TrispH2_008643
SAGA-associated factor 29.
    
 0.914
Your Current Organism:
Trichoplax sp. H2
NCBI taxonomy Id: 287889
Other names: T. sp. H2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.