STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TrispH2_005763MFS-type transporter SLC18B1. (210 aa)    
Predicted Functional Partners:
TrispH2_000666
Regulating synaptic membrane exocytosis protein 2.
     
 0.606
TrispH2_000541
Regulating synaptic membrane exocytosis protein 2.
     
 0.606
TrispH2_001744
Peripheral plasma membrane protein CASK; Belongs to the MAGUK family.
     
 0.598
TrispH2_007769
Protein unc-13-like protein B.
     
 0.548
TrispH2_002664
Syntaxin-binding protein 1; Belongs to the STXBP/unc-18/SEC1 family.
     
 0.540
TrispH2_006810
Ras-related protein Rab-3A.
     
 0.536
TrispH2_006809
Ras-related protein Rab-3C.
     
 0.536
TrispH2_005809
Uncharacterized protein.
     
 0.510
TrispH2_005280
Synaptobrevin.
     
 0.510
TrispH2_004541
Vesicle-associated membrane protein 2.
     
 0.510
Your Current Organism:
Trichoplax sp. H2
NCBI taxonomy Id: 287889
Other names: T. sp. H2
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