STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TrispH2_006601Ceramide synthase 1. (373 aa)    
Predicted Functional Partners:
TrispH2_004965
Alkaline ceramidase; Hydrolyzes the sphingolipid ceramide into sphingosine and free fatty acid.
    
 0.843
TrispH2_002029
Sphingolipid delta(4)-desaturase DES1; Belongs to the fatty acid desaturase type 1 family. DEGS subfamily.
    
 0.834
TrispH2_010437
Sphingosine-1-phosphate phosphatase 2.
    
 0.833
TrispH2_009877
Alkaline ceramidase; Hydrolyzes the sphingolipid ceramide into sphingosine and free fatty acid.
    
 0.829
TrispH2_002923
Putative neutral sphingomyelinase.
     
 0.811
TrispH2_009593
Ceramide glucosyltransferase.
     
 0.809
TrispH2_000207
3-ketodihydrosphingosine reductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
     
 0.809
TrispH2_007598
Neutral ceramidase.
     
 0.808
TrispH2_010452
Sphingomyelin synthase-related protein 1.
     
 0.802
TrispH2_001796
Coiled-coil domain-containing protein 115.
    
 0.790
Your Current Organism:
Trichoplax sp. H2
NCBI taxonomy Id: 287889
Other names: T. sp. H2
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