Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
TrispH2_000201 | TrispH2_000288 | A0A369SL43 | A0A369SLJ1 | Uncharacterized protein. | Argininosuccinate lyase. | 0.974 |
TrispH2_000201 | TrispH2_002849 | A0A369SL43 | A0A369SE42 | Uncharacterized protein. | Proline dehydrogenase; Converts proline to delta-1-pyrroline-5-carboxylate. | 0.869 |
TrispH2_000201 | TrispH2_003044 | A0A369SL43 | A0A369SBZ2 | Uncharacterized protein. | Argininosuccinate synthase. | 0.949 |
TrispH2_000201 | TrispH2_003574 | A0A369SL43 | A0A369SEX7 | Uncharacterized protein. | Glutamate dehydrogenase 1, mitochondrial; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | 0.890 |
TrispH2_000201 | TrispH2_004090 | A0A369SL43 | A0A369S8C1 | Uncharacterized protein. | Arginase. | 0.961 |
TrispH2_000201 | TrispH2_004151 | A0A369SL43 | A0A369SAD3 | Uncharacterized protein. | Glutamine synthetase. | 0.863 |
TrispH2_000201 | TrispH2_004621 | A0A369SL43 | A0A369SCL0 | Uncharacterized protein. | Spermidine synthase; Belongs to the spermidine/spermine synthase family. | 0.650 |
TrispH2_000201 | TrispH2_010367 | A0A369SL43 | A0A369RQX8 | Uncharacterized protein. | Ketimine reductase mu-crystallin. | 0.767 |
TrispH2_000288 | TrispH2_000201 | A0A369SLJ1 | A0A369SL43 | Argininosuccinate lyase. | Uncharacterized protein. | 0.974 |
TrispH2_000288 | TrispH2_002849 | A0A369SLJ1 | A0A369SE42 | Argininosuccinate lyase. | Proline dehydrogenase; Converts proline to delta-1-pyrroline-5-carboxylate. | 0.586 |
TrispH2_000288 | TrispH2_003044 | A0A369SLJ1 | A0A369SBZ2 | Argininosuccinate lyase. | Argininosuccinate synthase. | 0.999 |
TrispH2_000288 | TrispH2_003574 | A0A369SLJ1 | A0A369SEX7 | Argininosuccinate lyase. | Glutamate dehydrogenase 1, mitochondrial; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | 0.918 |
TrispH2_000288 | TrispH2_004090 | A0A369SLJ1 | A0A369S8C1 | Argininosuccinate lyase. | Arginase. | 0.920 |
TrispH2_000288 | TrispH2_004151 | A0A369SLJ1 | A0A369SAD3 | Argininosuccinate lyase. | Glutamine synthetase. | 0.647 |
TrispH2_000288 | TrispH2_004621 | A0A369SLJ1 | A0A369SCL0 | Argininosuccinate lyase. | Spermidine synthase; Belongs to the spermidine/spermine synthase family. | 0.744 |
TrispH2_000288 | TrispH2_005119 | A0A369SLJ1 | A0A369S4X2 | Argininosuccinate lyase. | Ornithine aminotransferase, mitochondrial; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | 0.975 |
TrispH2_000288 | TrispH2_010367 | A0A369SLJ1 | A0A369RQX8 | Argininosuccinate lyase. | Ketimine reductase mu-crystallin. | 0.848 |
TrispH2_002506 | TrispH2_002849 | A0A369SGL4 | A0A369SE42 | Histidine ammonia-lyase; Belongs to the PAL/histidase family. | Proline dehydrogenase; Converts proline to delta-1-pyrroline-5-carboxylate. | 0.483 |
TrispH2_002506 | TrispH2_003044 | A0A369SGL4 | A0A369SBZ2 | Histidine ammonia-lyase; Belongs to the PAL/histidase family. | Argininosuccinate synthase. | 0.483 |
TrispH2_002506 | TrispH2_004090 | A0A369SGL4 | A0A369S8C1 | Histidine ammonia-lyase; Belongs to the PAL/histidase family. | Arginase. | 0.969 |
page 1 of 5