Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
TrispH2_000013 | TrispH2_003068 | A0A369SL05 | A0A369SBX7 | Uracil phosphoribosyltransferase. | Uridine-cytidine kinase 2. | 0.818 |
TrispH2_000013 | TrispH2_004289 | A0A369SL05 | A0A369S9K2 | Uracil phosphoribosyltransferase. | Leucine-rich repeat serine/threonine-protein kinase 1. | 0.739 |
TrispH2_000013 | TrispH2_004439 | A0A369SL05 | A0A369S8R3 | Uracil phosphoribosyltransferase. | Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5. | 0.620 |
TrispH2_000403 | TrispH2_004289 | A0A369SLI5 | A0A369S9K2 | Spectrin alpha chain, non-erythrocytic 1. | Leucine-rich repeat serine/threonine-protein kinase 1. | 0.672 |
TrispH2_000403 | TrispH2_004439 | A0A369SLI5 | A0A369S8R3 | Spectrin alpha chain, non-erythrocytic 1. | Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5. | 0.623 |
TrispH2_001184 | TrispH2_004439 | A0A369SIV2 | A0A369S8R3 | Transcription initiation protein SPT3-like protein. | Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5. | 0.684 |
TrispH2_002540 | TrispH2_004289 | A0A369SFG5 | A0A369S9K2 | Armadillo segment polarity protein. | Leucine-rich repeat serine/threonine-protein kinase 1. | 0.739 |
TrispH2_002540 | TrispH2_004439 | A0A369SFG5 | A0A369S8R3 | Armadillo segment polarity protein. | Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5. | 0.620 |
TrispH2_003068 | TrispH2_000013 | A0A369SBX7 | A0A369SL05 | Uridine-cytidine kinase 2. | Uracil phosphoribosyltransferase. | 0.818 |
TrispH2_003068 | TrispH2_004289 | A0A369SBX7 | A0A369S9K2 | Uridine-cytidine kinase 2. | Leucine-rich repeat serine/threonine-protein kinase 1. | 0.739 |
TrispH2_003068 | TrispH2_004439 | A0A369SBX7 | A0A369S8R3 | Uridine-cytidine kinase 2. | Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5. | 0.620 |
TrispH2_003068 | TrispH2_006495 | A0A369SBX7 | A0A369S453 | Uridine-cytidine kinase 2. | Uridine kinase; Belongs to the uridine kinase family. | 0.830 |
TrispH2_004289 | TrispH2_000013 | A0A369S9K2 | A0A369SL05 | Leucine-rich repeat serine/threonine-protein kinase 1. | Uracil phosphoribosyltransferase. | 0.739 |
TrispH2_004289 | TrispH2_000403 | A0A369S9K2 | A0A369SLI5 | Leucine-rich repeat serine/threonine-protein kinase 1. | Spectrin alpha chain, non-erythrocytic 1. | 0.672 |
TrispH2_004289 | TrispH2_002540 | A0A369S9K2 | A0A369SFG5 | Leucine-rich repeat serine/threonine-protein kinase 1. | Armadillo segment polarity protein. | 0.739 |
TrispH2_004289 | TrispH2_003068 | A0A369S9K2 | A0A369SBX7 | Leucine-rich repeat serine/threonine-protein kinase 1. | Uridine-cytidine kinase 2. | 0.739 |
TrispH2_004289 | TrispH2_004439 | A0A369S9K2 | A0A369S8R3 | Leucine-rich repeat serine/threonine-protein kinase 1. | Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5. | 0.625 |
TrispH2_004289 | TrispH2_006495 | A0A369S9K2 | A0A369S453 | Leucine-rich repeat serine/threonine-protein kinase 1. | Uridine kinase; Belongs to the uridine kinase family. | 0.739 |
TrispH2_004289 | TrispH2_007481 | A0A369S9K2 | A0A369S2L3 | Leucine-rich repeat serine/threonine-protein kinase 1. | Integrin beta; Belongs to the integrin beta chain family. | 0.855 |
TrispH2_004289 | TrispH2_007482 | A0A369S9K2 | A0A369S4G3 | Leucine-rich repeat serine/threonine-protein kinase 1. | Integrin beta; Belongs to the integrin beta chain family. | 0.855 |
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