STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TrispH2_004439Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5. (266 aa)    
Predicted Functional Partners:
TrispH2_001184
Transcription initiation protein SPT3-like protein.
    
 0.684
TrispH2_011519
Integrin beta; Belongs to the integrin beta chain family.
    
  0.653
TrispH2_007481
Integrin beta; Belongs to the integrin beta chain family.
    
  0.653
TrispH2_007482
Integrin beta; Belongs to the integrin beta chain family.
    
  0.653
TrispH2_004289
Leucine-rich repeat serine/threonine-protein kinase 1.
    
 0.625
TrispH2_000403
Spectrin alpha chain, non-erythrocytic 1.
    
 0.623
TrispH2_006495
Uridine kinase; Belongs to the uridine kinase family.
    
 0.620
TrispH2_003068
Uridine-cytidine kinase 2.
    
 0.620
TrispH2_002540
Armadillo segment polarity protein.
    
 0.620
TrispH2_000013
Uracil phosphoribosyltransferase.
    
 0.620
Your Current Organism:
Trichoplax sp. H2
NCBI taxonomy Id: 287889
Other names: T. sp. H2
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