Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
TrispH2_000241 | TrispH2_000722 | A0A369SLH0 | A0A369SL56 | AN1-type zinc finger protein 4. | 40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family. | 0.996 |
TrispH2_000241 | TrispH2_001189 | A0A369SLH0 | A0A369SIV5 | AN1-type zinc finger protein 4. | E3 ubiquitin-protein ligase parkin; Functions within a multiprotein E3 ubiquitin ligase complex, catalyzing the covalent attachment of ubiquitin moieties onto substrate proteins; Belongs to the RBR family. Parkin subfamily. | 0.895 |
TrispH2_000241 | TrispH2_002546 | A0A369SLH0 | A0A369SEE0 | AN1-type zinc finger protein 4. | Next to BRCA1 gene 1 protein. | 0.996 |
TrispH2_000241 | TrispH2_004085 | A0A369SLH0 | A0A369S825 | AN1-type zinc finger protein 4. | Ubiquitin-40S ribosomal protein S27a. | 0.999 |
TrispH2_000241 | TrispH2_004100 | A0A369SLH0 | A0A369S955 | AN1-type zinc finger protein 4. | Serine/threonine-protein kinase PINK1, mitochondrial. | 0.886 |
TrispH2_000241 | TrispH2_005091 | A0A369SLH0 | A0A369SB18 | AN1-type zinc finger protein 4. | Dynamin-like 120 kDa protein, mitochondrial; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. | 0.682 |
TrispH2_000241 | TrispH2_006305 | A0A369SLH0 | A0A369S4F7 | AN1-type zinc finger protein 4. | Ubiquitin-60S ribosomal protein L40. | 0.659 |
TrispH2_000241 | TrispH2_006308 | A0A369SLH0 | A0A369S518 | AN1-type zinc finger protein 4. | Ubiquitin-60S ribosomal protein L40. | 0.999 |
TrispH2_000241 | TrispH2_006590 | A0A369SLH0 | A0A369S738 | AN1-type zinc finger protein 4. | Serine protease HTRA1. | 0.609 |
TrispH2_000722 | TrispH2_000241 | A0A369SL56 | A0A369SLH0 | 40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family. | AN1-type zinc finger protein 4. | 0.996 |
TrispH2_000722 | TrispH2_001189 | A0A369SL56 | A0A369SIV5 | 40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family. | E3 ubiquitin-protein ligase parkin; Functions within a multiprotein E3 ubiquitin ligase complex, catalyzing the covalent attachment of ubiquitin moieties onto substrate proteins; Belongs to the RBR family. Parkin subfamily. | 0.892 |
TrispH2_000722 | TrispH2_002546 | A0A369SL56 | A0A369SEE0 | 40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family. | Next to BRCA1 gene 1 protein. | 0.996 |
TrispH2_000722 | TrispH2_004085 | A0A369SL56 | A0A369S825 | 40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family. | Ubiquitin-40S ribosomal protein S27a. | 0.999 |
TrispH2_000722 | TrispH2_004100 | A0A369SL56 | A0A369S955 | 40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family. | Serine/threonine-protein kinase PINK1, mitochondrial. | 0.883 |
TrispH2_000722 | TrispH2_005091 | A0A369SL56 | A0A369SB18 | 40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family. | Dynamin-like 120 kDa protein, mitochondrial; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. | 0.658 |
TrispH2_000722 | TrispH2_006305 | A0A369SL56 | A0A369S4F7 | 40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family. | Ubiquitin-60S ribosomal protein L40. | 0.887 |
TrispH2_000722 | TrispH2_006308 | A0A369SL56 | A0A369S518 | 40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family. | Ubiquitin-60S ribosomal protein L40. | 0.999 |
TrispH2_000722 | TrispH2_006590 | A0A369SL56 | A0A369S738 | 40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family. | Serine protease HTRA1. | 0.609 |
TrispH2_000722 | TrispH2_008577 | A0A369SL56 | A0A369RWT9 | 40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family. | Mitochondrial import receptor subunit TOM7-like protein. | 0.766 |
TrispH2_001189 | TrispH2_000241 | A0A369SIV5 | A0A369SLH0 | E3 ubiquitin-protein ligase parkin; Functions within a multiprotein E3 ubiquitin ligase complex, catalyzing the covalent attachment of ubiquitin moieties onto substrate proteins; Belongs to the RBR family. Parkin subfamily. | AN1-type zinc finger protein 4. | 0.895 |
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