STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TrispH2_00536339S ribosomal protein L3, mitochondrial. (333 aa)    
Predicted Functional Partners:
TrispH2_002286
60S ribosomal protein L23; Belongs to the universal ribosomal protein uL14 family.
  
 0.999
TrispH2_010867
39S ribosomal protein L20, mitochondrial; Belongs to the bacterial ribosomal protein bL20 family.
   
 
 0.998
TrispH2_011278
50S ribosomal protein L27.
  
 
 0.998
TrispH2_008894
39S ribosomal protein L22, mitochondrial; Belongs to the universal ribosomal protein uL22 family.
  
 0.998
TrispH2_007659
39S ribosomal protein L11, mitochondrial; Belongs to the universal ribosomal protein uL11 family.
  
 0.998
TrispH2_007561
50S ribosomal protein L17; Belongs to the bacterial ribosomal protein bL17 family.
  
 
 0.998
TrispH2_004498
39S ribosomal protein L13, mitochondrial.
 
 0.998
TrispH2_005078
50S ribosomal protein L2.
  
 0.998
TrispH2_004275
39S ribosomal protein L19, mitochondrial.
  
 
 0.998
TrispH2_002697
Putative 28S ribosomal protein S16, mitochondrial.
   
 
 0.998
Your Current Organism:
Trichoplax sp. H2
NCBI taxonomy Id: 287889
Other names: T. sp. H2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.