STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TrispH2_004249Ubiquitin carboxyl-terminal hydrolase. (951 aa)    
Predicted Functional Partners:
TrispH2_001391
Histone H2A deubiquitinase MYSM1.
   
 
 0.742
TrispH2_000241
AN1-type zinc finger protein 4.
   
 0.728
TrispH2_008055
TNF receptor-associated factor 6-A.
    
 0.697
TrispH2_003261
Baculoviral IAP repeat-containing protein 6.
    
 0.685
TrispH2_003869
Ubiquitin carboxyl-terminal hydrolase.
    
0.685
TrispH2_006305
Ubiquitin-60S ribosomal protein L40.
    
 0.684
TrispH2_000722
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
    
 0.684
TrispH2_007354
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
   
  0.679
TrispH2_006308
Ubiquitin-60S ribosomal protein L40.
    
  0.677
TrispH2_004085
Ubiquitin-40S ribosomal protein S27a.
    
 0.673
Your Current Organism:
Trichoplax sp. H2
NCBI taxonomy Id: 287889
Other names: T. sp. H2
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