STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TrispH2_003660UPF0505 protein C16orf62-like protein. (968 aa)    
Predicted Functional Partners:
TrispH2_007072
Coiled-coil domain-containing protein 22-like protein.
    
 
 0.882
TrispH2_000316
Vacuolar protein sorting-associated protein 29; Acts as component of the retromer cargo-selective complex (CSC). The CSC is believed to be the core functional component of retromer or respective retromer complex variants acting to prevent missorting of selected transmembrane cargo proteins into the lysosomal degradation pathway.
    
 
 0.875
TrispH2_002220
Coiled-coil domain-containing protein 93.
    
 
 0.843
TrispH2_010038
COMM domain-containing protein 1.
    
 
 0.838
TrispH2_010919
COMM domain-containing protein 6.
    
 
 0.822
TrispH2_000940
COMM domain-containing protein 2.
    
 
 0.782
TrispH2_011106
Down syndrome critical region protein 3.
   
 
 0.778
TrispH2_005711
COMM domain-containing protein 3.
    
 
 0.772
TrispH2_002932
COMM domain-containing protein 4.
    
 
 0.737
TrispH2_002558
COMM domain-containing protein 10.
  
 
 
 0.695
Your Current Organism:
Trichoplax sp. H2
NCBI taxonomy Id: 287889
Other names: T. sp. H2
Server load: low (30%) [HD]