STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TrispH2_003929Programmed cell death protein 7. (402 aa)    
Predicted Functional Partners:
TrispH2_001391
Histone H2A deubiquitinase MYSM1.
   
 0.915
TrispH2_005965
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1.
    
 0.883
TrispH2_009398
Actin-like protein 6A; Belongs to the actin family.
    
 0.882
TrispH2_007147
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1.
    
 0.881
TrispH2_008263
Protein polybromo-1.
    
 0.877
TrispH2_002268
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1.
    
 0.865
TrispH2_004542
PHD finger protein 10.
    
 0.841
TrispH2_008989
AT-rich interactive domain-containing protein 1B.
    
 0.840
TrispH2_000194
Bromodomain-containing protein 7.
    
 0.835
TrispH2_002188
AT-rich interactive domain-containing protein 2.
    
 0.804
Your Current Organism:
Trichoplax sp. H2
NCBI taxonomy Id: 287889
Other names: T. sp. H2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.