STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TrispH2_003431Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC). (731 aa)    
Predicted Functional Partners:
TrispH2_010099
E3 SUMO-protein ligase RanBP2.
   
 0.999
TrispH2_009349
E3 SUMO-protein ligase RanBP2.
   
 0.999
TrispH2_007392
Nuclear pore complex protein Nup133.
   
 0.999
TrispH2_004969
Nuclear pore complex protein Nup160.
   
 0.999
TrispH2_006587
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
   
 0.999
TrispH2_006806
Nuclear pore complex protein Nup155.
   
 0.999
TrispH2_004751
Protein SEC13-like protein; Belongs to the WD repeat SEC13 family.
    
 0.999
TrispH2_001888
Nucleoporin Nup43.
   
 0.999
TrispH2_001834
Nuclear pore complex protein Nup98-Nup96.
   
 0.999
TrispH2_001499
Nucleoporin seh1; Belongs to the WD repeat SEC13 family.
   
 0.999
Your Current Organism:
Trichoplax sp. H2
NCBI taxonomy Id: 287889
Other names: T. sp. H2
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.