STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TrispH2_003411Transient receptor potential cation channel subfamily A member 1. (859 aa)    
Predicted Functional Partners:
TrispH2_001650
Tight junction protein ZO-2.
    
 0.656
KATNAL2
Katanin p60 ATPase-containing subunit A-like 2; Severs microtubules in vitro in an ATP-dependent manner. This activity may promote rapid reorganization of cellular microtubule arrays.
    
 0.651
TrispH2_000975
Intraflagellar transport protein 81-like protein.
    
 0.645
TrispH2_000313
Intraflagellar transport protein 22-like protein.
    
  0.642
TrispH2_001442
Intraflagellar transport protein 52-like protein.
    
 0.640
TrispH2_006275
Intraflagellar transport protein 57-like protein.
    
  0.630
TrispH2_000241
AN1-type zinc finger protein 4.
    
 0.625
TrispH2_007846
Tetratricopeptide repeat protein 30A.
    
  0.614
TrispH2_010048
Intraflagellar transport protein 56.
    
  0.613
TrispH2_004902
Intraflagellar transport protein 172-like protein.
    
 0.609
Your Current Organism:
Trichoplax sp. H2
NCBI taxonomy Id: 287889
Other names: T. sp. H2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.