STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TrispH2_002823Nucleoporin-like protein 2. (339 aa)    
Predicted Functional Partners:
TrispH2_007672
Leucine-rich repeat-containing protein 15.
    
 0.926
TrispH2_000722
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 0.881
TrispH2_007653
Exportin-1.
     
 0.730
TrispH2_004169
Nuclear pore complex protein Nup214.
    
 0.728
TrispH2_000320
Nucleoporin GLE1.
    
 0.727
TrispH2_004788
Aladin.
    
 0.720
TrispH2_006795
Histone chaperone ASF1.
    
 0.695
TrispH2_004289
Leucine-rich repeat serine/threonine-protein kinase 1.
    
 0.692
TrispH2_004507
mRNA export factor.
    
 0.672
TrispH2_006587
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
    
 0.670
Your Current Organism:
Trichoplax sp. H2
NCBI taxonomy Id: 287889
Other names: T. sp. H2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.