STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TrispH2_002310Tetratricopeptide repeat protein 21B. (1315 aa)    
Predicted Functional Partners:
TrispH2_005053
Protein unc-79-like protein.
   
 0.997
TrispH2_009172
WD repeat-containing protein 35.
   
 0.982
TrispH2_009066
Intraflagellar transport protein 140-like protein.
  
 0.979
TrispH2_004917
Intraflagellar transport protein 122-like protein.
   
 0.979
TrispH2_008170
Intraflagellar transport protein 43-like protein.
    
 0.969
TrispH2_010283
WD repeat-containing protein 19.
   
 0.962
TrispH2_001364
Intraflagellar transport protein 74-like protein.
   
 0.859
TrispH2_000975
Intraflagellar transport protein 81-like protein.
     
 0.840
TrispH2_003308
Intraflagellar transport protein 20-like protein.
    
 0.827
TrispH2_008931
Intraflagellar transport protein 80-like protein.
   
 0.816
Your Current Organism:
Trichoplax sp. H2
NCBI taxonomy Id: 287889
Other names: T. sp. H2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.