STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TrispH2_002258FYVE and coiled-coil domain-containing protein 1. (654 aa)    
Predicted Functional Partners:
TrispH2_000094
Ras-related protein Rab-7a.
    
 0.903
TrispH2_008259
Microtubule-associated proteins 1A/1B light chain 3A.
   
 
 0.894
TrispH2_011785
Calcium uptake protein 1, mitochondrial.
   
 0.709
TrispH2_000343
Ras-related protein Rab-4B.
    
 0.675
TrispH2_002747
Essential MCU regulator, mitochondrial.
     
 0.660
TrispH2_009561
Calcium uniporter protein, mitochondrial.
     
 0.651
TrispH2_012151
Tyrosine-protein kinase HCK.
    
 0.647
TrispH2_009874
Tyrosine-protein kinase.
    
 0.647
TrispH2_009875
Tyrosine-protein kinase.
    
 0.647
TrispH2_009873
Tyrosine-protein kinase.
    
 0.647
Your Current Organism:
Trichoplax sp. H2
NCBI taxonomy Id: 287889
Other names: T. sp. H2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.