Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
TrispH2_000565 | TrispH2_001030 | A0A369SR70 | A0A369SI62 | Ras-related protein Rab-10. | Ras-related protein Rab-11B. | 0.824 |
TrispH2_000565 | TrispH2_001583 | A0A369SR70 | A0A369SJD9 | Ras-related protein Rab-10. | Geranylgeranyl transferase type-2 subunit alpha. | 0.683 |
TrispH2_000565 | TrispH2_001833 | A0A369SR70 | A0A369SHE5 | Ras-related protein Rab-10. | Rab proteins geranylgeranyltransferase component A; Substrate-binding subunit (component A) of the Rab geranylgeranyltransferase (GGTase) complex. Binds unprenylated Rab proteins and presents the substrate peptide to the catalytic component B. The component A is thought to be regenerated by transferring its prenylated Rab back to the donor membrane. | 0.733 |
TrispH2_000565 | TrispH2_002673 | A0A369SR70 | A0A369SEU8 | Ras-related protein Rab-10. | Geranylgeranyl transferase type-2 subunit beta; Catalyzes the transfer of a geranylgeranyl moiety from geranylgeranyl diphosphate to both cysteines of proteins with the C- terminal sequence -XXCC, -XCXC and -CCXX. | 0.795 |
TrispH2_000565 | TrispH2_003921 | A0A369SR70 | A0A369SB71 | Ras-related protein Rab-10. | Protein prenyltransferase alpha subunit repeat-containing protein 1-B. | 0.561 |
TrispH2_000565 | TrispH2_004722 | A0A369SR70 | A0A369SAD5 | Ras-related protein Rab-10. | Ras-related protein Rab-43. | 0.669 |
TrispH2_000565 | TrispH2_009041 | A0A369SR70 | A0A369RYK5 | Ras-related protein Rab-10. | Ras-related protein Rab-1A. | 0.956 |
TrispH2_001030 | TrispH2_000565 | A0A369SI62 | A0A369SR70 | Ras-related protein Rab-11B. | Ras-related protein Rab-10. | 0.824 |
TrispH2_001030 | TrispH2_001583 | A0A369SI62 | A0A369SJD9 | Ras-related protein Rab-11B. | Geranylgeranyl transferase type-2 subunit alpha. | 0.718 |
TrispH2_001030 | TrispH2_001833 | A0A369SI62 | A0A369SHE5 | Ras-related protein Rab-11B. | Rab proteins geranylgeranyltransferase component A; Substrate-binding subunit (component A) of the Rab geranylgeranyltransferase (GGTase) complex. Binds unprenylated Rab proteins and presents the substrate peptide to the catalytic component B. The component A is thought to be regenerated by transferring its prenylated Rab back to the donor membrane. | 0.750 |
TrispH2_001030 | TrispH2_002673 | A0A369SI62 | A0A369SEU8 | Ras-related protein Rab-11B. | Geranylgeranyl transferase type-2 subunit beta; Catalyzes the transfer of a geranylgeranyl moiety from geranylgeranyl diphosphate to both cysteines of proteins with the C- terminal sequence -XXCC, -XCXC and -CCXX. | 0.803 |
TrispH2_001030 | TrispH2_003921 | A0A369SI62 | A0A369SB71 | Ras-related protein Rab-11B. | Protein prenyltransferase alpha subunit repeat-containing protein 1-B. | 0.602 |
TrispH2_001030 | TrispH2_004722 | A0A369SI62 | A0A369SAD5 | Ras-related protein Rab-11B. | Ras-related protein Rab-43. | 0.735 |
TrispH2_001030 | TrispH2_005008 | A0A369SI62 | A0A369SAL8 | Ras-related protein Rab-11B. | Synaptobrevin-like protein YKT6; Belongs to the synaptobrevin family. | 0.655 |
TrispH2_001030 | TrispH2_009041 | A0A369SI62 | A0A369RYK5 | Ras-related protein Rab-11B. | Ras-related protein Rab-1A. | 0.907 |
TrispH2_001030 | TrispH2_011098 | A0A369SI62 | A0A369RR40 | Ras-related protein Rab-11B. | Ras-related protein Rab-8A. | 0.822 |
TrispH2_001583 | TrispH2_000565 | A0A369SJD9 | A0A369SR70 | Geranylgeranyl transferase type-2 subunit alpha. | Ras-related protein Rab-10. | 0.683 |
TrispH2_001583 | TrispH2_001030 | A0A369SJD9 | A0A369SI62 | Geranylgeranyl transferase type-2 subunit alpha. | Ras-related protein Rab-11B. | 0.718 |
TrispH2_001583 | TrispH2_001833 | A0A369SJD9 | A0A369SHE5 | Geranylgeranyl transferase type-2 subunit alpha. | Rab proteins geranylgeranyltransferase component A; Substrate-binding subunit (component A) of the Rab geranylgeranyltransferase (GGTase) complex. Binds unprenylated Rab proteins and presents the substrate peptide to the catalytic component B. The component A is thought to be regenerated by transferring its prenylated Rab back to the donor membrane. | 0.979 |
TrispH2_001583 | TrispH2_002673 | A0A369SJD9 | A0A369SEU8 | Geranylgeranyl transferase type-2 subunit alpha. | Geranylgeranyl transferase type-2 subunit beta; Catalyzes the transfer of a geranylgeranyl moiety from geranylgeranyl diphosphate to both cysteines of proteins with the C- terminal sequence -XXCC, -XCXC and -CCXX. | 0.999 |
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